Pairwise Alignments

Query, 534 a.a., Lysyl-tRNA synthetase (class II) (EC 6.1.1.6) from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 500 a.a., lysyl-tRNA synthetase (RefSeq) from Shewanella loihica PV-4

 Score =  507 bits (1305), Expect = e-148
 Identities = 269/511 (52%), Positives = 349/511 (68%), Gaps = 25/511 (4%)

Query: 32  DDNQLIAERREKLKALREAQKQGQGVAFPNDFKPVDKAADLFARYGETTKEALEAEPVRA 91
           D+N+LIAERR KL  +R +         PN+F    KAAD+ A YG+ +KE LE   V+ 
Sbjct: 7   DENKLIAERRAKLDHVRASCPAN---GHPNNFDRKHKAADIQAEYGQYSKEELEEMNVQR 63

Query: 92  SVAGRMMLKRVMGKASFATLQDASFGPSGGRIQIYVNNDGVGEAQHGAFKHWDLGDIIAV 151
           S+AGR+M KR      F  +QD S     GRIQ Y   D V +     ++  D+GDII V
Sbjct: 64  SIAGRIMAKR----GPFLVIQDVS-----GRIQAYAGKD-VQKDLKAKYQGLDIGDIIGV 113

Query: 152 EGVLMRTRTGELTIQADRIRLITKSLRPLPDKFHGIADQEIKYRQRYVDLMTDETARRRF 211
            G L  +  G+L +  +  +L+TK+LRPLP+KFHG+ DQE +YRQRYVDL+ +E +R  F
Sbjct: 114 TGQLHLSGKGDLYVNMEEYQLLTKALRPLPEKFHGLTDQETRYRQRYVDLIVNEESRAAF 173

Query: 212 VARSQALASIRDFMVSHGFLEVETPMLHPIPGGANAKPFKTHHNALDQEMFLRIAPELYL 271
           + RS+ + +IR+FMVS  F+EVETPM+H IPGGA+A+PF THHNALD EM+LRIAPELYL
Sbjct: 174 IMRSKVVTAIRNFMVSKEFMEVETPMMHSIPGGASARPFITHHNALDIEMYLRIAPELYL 233

Query: 272 KRLLVGGFDRVFEINRNFRNEGISVRHNPEFTMMEFYAAYWNYQDLMDFNEQLIRHVVRQ 331
           KRL+VGGF+RVFEINRNFRNEG+S RHNPEFTMMEFY AY +Y+DLMD  E+++  + + 
Sbjct: 234 KRLVVGGFERVFEINRNFRNEGLSPRHNPEFTMMEFYMAYADYKDLMDLTEEMLSSIAKD 293

Query: 332 VRGDEPLTYQGQPVDILSPFERLTIREAIVKYTDAGDS--------VDDAAWLQAQLKKL 383
           + GD  L Y    +D   P+ERL++ +AI KY    ++        V D  +++   K L
Sbjct: 294 LLGDTKLPYGEHTIDFGGPYERLSMLDAIKKYNPDNETIQSMTYEEVKDVEFMRNLAKSL 353

Query: 384 GLSEEKHQLSGRSLPSLQVLYFEEKVEDKLWNPTFIMDHPTEISPLARANDANPAVTERF 443
           G++ EK    G+ L  +    F E  E KL  PTFI  +P +ISPLAR ND N  +T+RF
Sbjct: 354 GMTIEKFWTCGQLLEEI----FGETAEPKLMQPTFITGYPADISPLARRNDENHFITDRF 409

Query: 444 ELYITGREFGNAFSELNDAEDQAARFQAQASAKDGGDEEAMYYDADYIRALEYGMPPAGG 503
           E +I GRE  N FSELNDAEDQ  RF+AQ  AKD GD+EAM+YDADYI ALE+G+PP  G
Sbjct: 410 EFFIGGREVANGFSELNDAEDQDKRFKAQVDAKDAGDDEAMFYDADYITALEHGLPPTAG 469

Query: 504 CGIGIDRLMMLLTDSPSIRDVILFPALRREG 534
            GIGIDRL+ML T++ +IRDVILFPA+R +G
Sbjct: 470 QGIGIDRLVMLFTNTHTIRDVILFPAMRPQG 500