Pairwise Alignments

Query, 534 a.a., Lysyl-tRNA synthetase (class II) (EC 6.1.1.6) from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 501 a.a., lysyl-tRNA synthetase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  474 bits (1219), Expect = e-138
 Identities = 255/493 (51%), Positives = 323/493 (65%), Gaps = 10/493 (2%)

Query: 43  KLKALREAQKQGQGVA-FPNDFKPVDKAADLFARYGETTKEALEAEPVRASVAGRMMLKR 101
           K + ++  +    GVA +PN F      A + A Y   T E LE    R + AGR++ +R
Sbjct: 16  KNRVVKSCELLDDGVALYPNGFVKQHDVAAISAEYEGLTAEELENVDTRFTCAGRIVSQR 75

Query: 102 VMGKASFATLQDASFGPSGGRIQIYVNNDGVGEAQHGAFKHWDLGDIIAVEGVLMRTRTG 161
             GK +F  L D S     GR+Q Y   + +GE  +  FK  D+GDI+ V G L RT+TG
Sbjct: 76  SFGKVTFFHLMDKS-----GRLQCYTAREVLGEDPYRNFKKLDIGDIVGVSGTLFRTKTG 130

Query: 162 ELTIQADRIRLITKSLRPLPDKFHGIADQEIKYRQRYVDLMTDETARRRFVARSQALASI 221
           ELT+  D+  L+TKS+RPLP+K+HG+ D E +YRQRYVDL+     R  F  R+  +   
Sbjct: 131 ELTLSCDQCILLTKSIRPLPEKYHGLKDVETRYRQRYVDLIVTPRTREIFRKRTLIVREF 190

Query: 222 RDFMVSHGFLEVETPMLHPIPGGANAKPFKTHHNALDQEMFLRIAPELYLKRLLVGGFDR 281
           R F+   GF+EVETPM+ PIPGGA A PF THHNALD ++++RIAPELYLKRLLVGGF++
Sbjct: 191 RRFLEDKGFMEVETPMMQPIPGGATAMPFITHHNALDMQLYMRIAPELYLKRLLVGGFEK 250

Query: 282 VFEINRNFRNEGISVRHNPEFTMMEFYAAYWNYQDLMDFNEQLIRHVVRQVRGDEPLTYQ 341
           VFEINRNFRNEGIS RHNPEFTM EFY AY  ++DLMD  EQL  HV  +V G   +TYQ
Sbjct: 251 VFEINRNFRNEGISTRHNPEFTMCEFYWAYATFEDLMDLTEQLFAHVAEKVCGSYVVTYQ 310

Query: 342 GQPVDIL-SPFERLTIREAIVKYTDAGDSVDDAAWLQAQLKKLGLSEEKHQLSGRSLPSL 400
           GQ VD+    + RL+  +++ K    G   +     +A  K +    EK  + G  +  L
Sbjct: 311 GQEVDLTPGRWTRLSFHDSLEKI--GGHKPEFYNDYEAVRKYIRERGEK-VVDGEKMAKL 367

Query: 401 QVLYFEEKVEDKLWNPTFIMDHPTEISPLARANDANPAVTERFELYITGREFGNAFSELN 460
           Q   F+  VE KL  PTFI  +PT+ISPL+R N+  P VT+RFEL+ITGRE GNAFSELN
Sbjct: 368 QAKLFDLDVEGKLIQPTFIYHYPTDISPLSRRNNERPDVTDRFELFITGRELGNAFSELN 427

Query: 461 DAEDQAARFQAQASAKDGGDEEAMYYDADYIRALEYGMPPAGGCGIGIDRLMMLLTDSPS 520
           D  DQ  RF  Q + K+ GD EA + D DY+RALEYGMPPA G G+GIDRL+MLLTDSPS
Sbjct: 428 DPVDQRMRFMDQVAEKEAGDAEAHFMDEDYLRALEYGMPPAAGEGVGIDRLVMLLTDSPS 487

Query: 521 IRDVILFPALRRE 533
           IR+VILFP L+ E
Sbjct: 488 IREVILFPLLKPE 500