Pairwise Alignments

Query, 309 a.a., High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1) from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 307 a.a., Branched-chain amino acid ABC-type transport system, permease components from Pseudomonas stutzeri RCH2

 Score =  259 bits (663), Expect = 4e-74
 Identities = 135/303 (44%), Positives = 203/303 (66%), Gaps = 15/303 (4%)

Query: 5   LQQIINGLVLGSMYALVALGYTMVYGIIGLINFAHGDVLMVGALTSW-TVIGWMMNASTG 63
           LQQ+INGL +GS YAL+A+GYTMVYGIIG+INFAHG+V M+G+  ++  ++G  M     
Sbjct: 8   LQQLINGLTVGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVTFIAIVGLSMMGLDA 67

Query: 64  LPTWLILFLATIIAMVVCATLNFTIEKLAYRPLRNSNRLAPLITAIGMSLLLQTFAMIIW 123
           LP  +++  A + AM+V +   ++IE++AYRPLR SNRL PLI+AIGMS+ LQ   ++  
Sbjct: 68  LP--ILMIGAFVAAMIVTSAYGYSIERVAYRPLRGSNRLIPLISAIGMSIFLQNVVLLAQ 125

Query: 124 APNPKSYPSMLSREPI----AIGGAVVSVTQVVILATTAVTLAFLMWLVNRTNLGRAMRA 179
               K+ P+++    +    A+ G V+S  Q++I   T V +  L   ++R+ LGRA RA
Sbjct: 126 DSKDKAIPNLMPGNLVIGESAMNGVVISYMQILIFVVTFVAMYGLTLFISRSRLGRACRA 185

Query: 180 TAENPRVAALMGIKPDVVISATFIIGAMLAAIAGVMWASNYGTVQHAMGFMPGLKAFVAA 239
            AE+ ++A L+GI  + +I+ TF+IGA LAA+A V+ +  YG +   +GF+ G+KAF AA
Sbjct: 186 CAEDLKMANLLGINTNSIIALTFVIGAALAAVAAVLISMQYGVINPHIGFLAGIKAFTAA 245

Query: 240 VMGGIGNLAGAVVGGIALGLIESLGAGYLGKLTGGVLGSQYTDIFAFIVLAIVLTLRPSG 299
           V+GGIG++ GA++GG+ LG+ E+ GA         + G QY D+ AF +L +VL  RP+G
Sbjct: 246 VLGGIGSIPGAMLGGLVLGVAEAFGA--------DIFGDQYKDVVAFSLLILVLLFRPTG 297

Query: 300 LLG 302
           +LG
Sbjct: 298 ILG 300