Pairwise Alignments

Query, 309 a.a., High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1) from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 307 a.a., high-affinity branched-chain amino acid ABC transporter, permease protein from Marinobacter adhaerens HP15

 Score =  242 bits (618), Expect = 7e-69
 Identities = 130/304 (42%), Positives = 200/304 (65%), Gaps = 17/304 (5%)

Query: 6   QQIINGLVLGSMYALVALGYTMVYGIIGLINFAHGDVLMVGALTSWTVIGWMMNASTGLP 65
           QQ+INGL +GS YAL+A+GYTMVYGIIG+INFAHG++ M+GA T+   I  +  A+ G+ 
Sbjct: 9   QQLINGLTIGSTYALIAIGYTMVYGIIGMINFAHGEIYMIGAYTALIAITGL--AALGI- 65

Query: 66  TWL--ILFLATIIAMVVCATLNFTIEKLAYRPLRNSNRLAPLITAIGMSLLLQTFAMIIW 123
            WL  IL +A + AM+V +++ + +E++AYRP+R  +RL PLI+AIGMS+ LQ +  +  
Sbjct: 66  AWLPLILIVALLCAMIVSSSMGWAVERVAYRPVRGRHRLIPLISAIGMSIFLQNYVHLAQ 125

Query: 124 APNPKSYPSMLSREPIAIGG----AVVSVTQVVILATTAVTLAFLMWLVNRTNLGRAMRA 179
                 +P+++        G      +S  Q+ I  TT + +  L   ++R+  GRA RA
Sbjct: 126 GSRNIGFPALIDGGFNFGSGDGFQMSLSYMQITIFITTLICMTALSLFISRSRTGRACRA 185

Query: 180 TAENPRVAALMGIKPDVVISATFIIGAMLAAIAGVMWASNYGTVQHAMGFMPGLKAFVAA 239
            +++  +A L+GI  + +ISATF+IGA LAA+AG++    YG+V    GF+ GLKAF AA
Sbjct: 186 VSQDLGMANLLGIDTNRIISATFVIGAALAAVAGLLLGMYYGSVDPLFGFIAGLKAFTAA 245

Query: 240 VMGGIGNLAGAVVGGIALGLIESLGAGYLGKLTGGVLGSQYTDIFAFIVLAIVLTLRPSG 299
           V+GGIG++ GA++GG+ LG+ ES+ +GY        L  +Y D+ +F +L ++L  +P+G
Sbjct: 246 VLGGIGSIPGAMLGGLILGVAESMTSGY--------LSGEYKDVISFSLLILILLFKPTG 297

Query: 300 LLGE 303
           LLG+
Sbjct: 298 LLGK 301