Pairwise Alignments

Query, 539 a.a., Peptide chain release factor 3 from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 556 a.a., peptide chain release factor 3 from Synechococcus elongatus PCC 7942

 Score =  479 bits (1233), Expect = e-139
 Identities = 253/528 (47%), Positives = 343/528 (64%), Gaps = 8/528 (1%)

Query: 3   DIPNQVRRRRTFAIISHPDAGKTTLTEKLLLFSGAINIAGSVKARKAARHATSDWMEIEK 62
           +I   V++RR FAIISHPDAGKTTLTEKLLL+ GAI  AG+VKA+++ R ATSDWME+EK
Sbjct: 22  EIQEAVQQRRNFAIISHPDAGKTTLTEKLLLYGGAIQEAGAVKAKRSQRAATSDWMELEK 81

Query: 63  QRGISVASSVMQMEYRDCVINLLDTPGHQDFSEDTYRVLTAVDAALMVIDAGNGVEPQTR 122
           QRGIS+ S+V+Q  Y DC INLLDTPGHQDFSEDTYR L A D A+M+ DA  G+EPQTR
Sbjct: 82  QRGISITSTVLQFNYHDCTINLLDTPGHQDFSEDTYRTLAAADNAVMLEDAAKGLEPQTR 141

Query: 123 RLLQVCRARNTPILTFVNKMDREVQAPLDLMDEIERELGMTVVPFTWPVGMGKTFRGVFD 182
           +L +VCR RN PI TF NKMDR  + PL+L+DEIE+ELG+      WP+G G  FRGVFD
Sbjct: 142 KLFEVCRMRNIPIFTFFNKMDRPGREPLELLDEIEQELGLQTYAVNWPIGSGDRFRGVFD 201

Query: 183 RRTDQMRVFAAGEDRRGGDEDVLAGLDNPESLKRFGAE-FEQARDELELVAGASPAFEED 241
           RR  Q+ +F      +   +D      +P+       +  +Q +DELEL+ G    F+ +
Sbjct: 202 RRKQQVHLFERSVHGKRQAKDTTLEWGDPQLADLIEPDLLQQLQDELELLEGVGTEFDLE 261

Query: 242 KFLAGQQTPMLFGSAVNNFGVREVLDALVDLAPPPGERPAIQRTVKPEETKFSGVVFKIQ 301
              AGQ TP+ +GSA+ NFGV   L+A +D A  PG R +    + P+  +FSG VFK+Q
Sbjct: 262 AIHAGQLTPVFWGSAMTNFGVELFLEAFLDYALKPGARRSSVGDMAPDYPEFSGFVFKLQ 321

Query: 302 ANMDPAHRDRIAFVRVASGHFERGMKLKVVRSGKDLRPNTVVSFLSQRRELLDEAFAGDI 361
           ANMDP HRDRIAFVRV +G FE+ M ++  RSG+ LR +       Q RE+LD+A+ GD+
Sbjct: 322 ANMDPRHRDRIAFVRVCTGKFEKDMTVQHARSGRTLRLSRPQKLFGQDREVLDDAYPGDV 381

Query: 362 IGIPNHGVLQLGDTLTEGESLQFTGLPFFAPEIIRSVEVADPLRSKQLRAGLTQLGEEGA 421
           IG+ N G+  +GDT+  G+ L++ G+P F+PEI   +   +P + K  R G+++L EEGA
Sbjct: 382 IGLNNPGMFAIGDTIYTGKRLEYDGIPCFSPEIFAYLRNPNPSKFKPFRKGVSELREEGA 441

Query: 422 IQVFRPV--AGSVLLLGAVGQLQFEVVAHRLEHEYGVKARIMNSPYQVARWVTCAPEDGG 479
           +Q+      A    +L AVGQLQ EVV +RLE+EYGV+  +   P+ VARWV     +GG
Sbjct: 442 VQIMYSADSAKRDPILAAVGQLQLEVVQYRLENEYGVETLLEPLPFSVARWV-----EGG 496

Query: 480 EVELKRFIDANSHRVALDAVDAPTLLVDHAATLRAVEANWPKIKFHAM 527
              L++     +     D    P LL  +   LR +EA+ P+++  ++
Sbjct: 497 WDVLEKVGRLFNTTTVKDTWGRPVLLFKNEWNLRQIEADHPELQLRSV 544