Pairwise Alignments

Query, 539 a.a., Peptide chain release factor 3 from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 528 a.a., peptide chain release factor 3 (RefSeq) from Shewanella amazonensis SB2B

 Score =  543 bits (1399), Expect = e-159
 Identities = 279/525 (53%), Positives = 367/525 (69%), Gaps = 5/525 (0%)

Query: 7   QVRRRRTFAIISHPDAGKTTLTEKLLLFSGAINIAGSVKARKAARHATSDWMEIEKQRGI 66
           +V  RRTFAIISHPDAGKTT+TEK+LL   AI  AG+VK R + +HA SDWME+EK+RGI
Sbjct: 8   EVASRRTFAIISHPDAGKTTITEKVLLHGRAIQSAGTVKGRGSGQHAKSDWMEMEKERGI 67

Query: 67  SVASSVMQMEYRDCVINLLDTPGHQDFSEDTYRVLTAVDAALMVIDAGNGVEPQTRRLLQ 126
           SV +SVMQ  Y  C++NLLDTPGH+DFSEDTYR LTAVD+ LMVIDA  GVE +TR+L++
Sbjct: 68  SVTTSVMQFPYNSCLVNLLDTPGHEDFSEDTYRTLTAVDSCLMVIDAAKGVEDRTRKLME 127

Query: 127 VCRARNTPILTFVNKMDREVQAPLDLMDEIERELGMTVVPFTWPVGMGKTFRGVFDRRTD 186
           V R R+TPI+TF+NK+DR+++ P++L+DE+E EL +   P TWP+G GK F+GV+    D
Sbjct: 128 VTRLRDTPIVTFMNKLDRDIRDPMELLDEVETELNILCAPITWPIGCGKLFKGVYHLHRD 187

Query: 187 QMRVFAAGEDRRGGDEDVLAGLDNPESLKRFGAEF-EQARDELELVAGASPAFEEDKFLA 245
           +  ++  G      +  ++ GLDNP+     G++F EQ R+ELELV GAS  F+++ FL+
Sbjct: 188 ETILYQTGHGHTIQELRIVKGLDNPDLDAAVGSDFAEQLREELELVRGASNEFDKELFLS 247

Query: 246 GQQTPMLFGSAVNNFGVREVLDALVDLAPPPGERPAIQRTVKPEETKFSGVVFKIQANMD 305
           G+ TP+ FG+A+ NFGV  +LD L + AP P  R   +RTV+  E KFSG VFKIQANMD
Sbjct: 248 GELTPVYFGTALGNFGVDHMLDGLTEWAPAPMPRETSERTVEAGEDKFSGFVFKIQANMD 307

Query: 306 PAHRDRIAFVRVASGHFERGMKLKVVRSGKDLRPNTVVSFLSQRRELLDEAFAGDIIGIP 365
           P HRDRIAF+R+ SG + +GMK+K VR GK +  +  V+F++  RE  +EAFAGDIIG+ 
Sbjct: 308 PKHRDRIAFMRIVSGKYTQGMKMKHVRIGKTVNISDAVTFMAGDRERAEEAFAGDIIGLH 367

Query: 366 NHGVLQLGDTLTEGESLQFTGLPFFAPEIIRSVEVADPLRSKQLRAGLTQLGEEGAIQVF 425
           NHG +Q+GDT T+GE L+FTG+P FAPE+ R + + DPL+ KQL  GL QL EEGA+QVF
Sbjct: 368 NHGTIQIGDTFTQGEDLKFTGIPNFAPEMFRRIRLKDPLKQKQLLKGLVQLSEEGAVQVF 427

Query: 426 RPVAGSVLLLGAVGQLQFEVVAHRLEHEYGVKARIMNSPYQVARWVTCAPEDGGEVELKR 485
           RP+  + L++GAVG LQFEVV  RL+ EY V+A         ARWV C  EDG ++E   
Sbjct: 428 RPLDTNDLIVGAVGVLQFEVVVARLKSEYNVEAIYEAVNVATARWVYC--EDGRKLE--E 483

Query: 486 FIDANSHRVALDAVDAPTLLVDHAATLRAVEANWPKIKFHAMREH 530
           F    S  +ALD  D  T +      L      +P I+F   REH
Sbjct: 484 FKRKCSTNLALDGGDNLTYIAPTMVNLNLSMERYPDIQFAKTREH 528