Pairwise Alignments

Query, 539 a.a., Peptide chain release factor 3 from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 535 a.a., peptide chain release factor 3 from Phaeobacter inhibens DSM 17395

 Score =  507 bits (1305), Expect = e-148
 Identities = 256/528 (48%), Positives = 354/528 (67%), Gaps = 6/528 (1%)

Query: 3   DIPNQVRRRRTFAIISHPDAGKTTLTEKLLLFSGAINIAGSVKARKAARHATSDWMEIEK 62
           D+P ++ RRRTFAIISHPDAGKTTLTEK LL+ GAI +AG V+A+  AR   SD+M++EK
Sbjct: 10  DLPAEIARRRTFAIISHPDAGKTTLTEKFLLYGGAIQMAGQVRAKGEARRTRSDFMQMEK 69

Query: 63  QRGISVASSVMQMEYRDCVINLLDTPGHQDFSEDTYRVLTAVDAALMVIDAGNGVEPQTR 122
            RGISV++S M  +Y +   NL+DTPGH DFSEDTYR LTAVDAA+MVID   GVE QT+
Sbjct: 70  DRGISVSASAMSFDYANYRFNLVDTPGHSDFSEDTYRTLTAVDAAVMVIDGAKGVESQTQ 129

Query: 123 RLLQVCRARNTPILTFVNKMDREVQAPLDLMDEIERELGMTVVPFTWPVGMGKTFRGVFD 182
           +L +VCR R+ PILTF NKMDRE +   +++DEI++ L + V P +WP+G+G+ F G +D
Sbjct: 130 KLFEVCRLRDLPILTFCNKMDRESRDTFEIIDEIQQNLAIDVTPASWPIGVGRDFIGCYD 189

Query: 183 RRTDQMRVFAAGEDRRGGDEDVLAGLDNPESLKRFGAEF-EQARDELELVAGASPAFEED 241
              D++ +    +  +  +   + GLD+P+  +       E+  +E+E+     P  +  
Sbjct: 190 MLRDRLELMDRADRNKIAESIEINGLDDPQLAEHVPEHLLEKLLEEVEMARELLPTLDPQ 249

Query: 242 KFLAGQQTPMLFGSAVNNFGVREVLDALVDLAPPPGERPAIQRTVKPEETKFSGVVFKIQ 301
             L G  TP+ FGSA+N+FGV+E++D +    P P  + A  R + P+ETK +G VFK+Q
Sbjct: 250 SVLEGHMTPIWFGSAINSFGVKELMDGISTYGPEPQPQTAQPRQIAPDETKVAGFVFKVQ 309

Query: 302 ANMDPAHRDRIAFVRVASGHFERGMKLKVVRSGKDLRPNTVVSFLSQRRELLDEAFAGDI 361
           ANMDP HRDR+AFVR+ASGHF+RGMKL  VRS K +  +  V FL+  REL +EA+AGDI
Sbjct: 310 ANMDPKHRDRVAFVRLASGHFKRGMKLTHVRSKKPMAISNPVLFLASDRELAEEAWAGDI 369

Query: 362 IGIPNHGVLQLGDTLTEGESLQFTGLPFFAPEIIRSVEVADPLRSKQLRAGLTQLGEEGA 421
           IGIPNHG L++GDTLTEGE+L+ +G+P FAPE+++ V   DP+++K L   L Q  EEGA
Sbjct: 370 IGIPNHGQLRIGDTLTEGEALRVSGIPSFAPELLQGVRAGDPMKAKHLEKALMQFAEEGA 429

Query: 422 IQVFRPVAGSVLLLGAVGQLQFEVVAHRLEHEYGVKARIMNSPYQVARWVTCAPEDGGEV 481
            +VF+P  GS  ++G VGQLQFEV+A R+E EYG+  R   S +  ARWV     +G ++
Sbjct: 430 AKVFKPSIGSGFIVGVVGQLQFEVLASRIEMEYGLPVRFEASQFTSARWV-----NGDKL 484

Query: 482 ELKRFIDANSHRVALDAVDAPTLLVDHAATLRAVEANWPKIKFHAMRE 529
            L +FI+ N   +A D       L      +  VE ++P +K  A +E
Sbjct: 485 ALDKFINTNKQHIAYDNDGDVVYLTRLQWDIDRVERDFPDLKLTATKE 532