Pairwise Alignments

Query, 539 a.a., Peptide chain release factor 3 from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 526 a.a., peptide chain release factor 3 (RefSeq) from Shewanella loihica PV-4

 Score =  532 bits (1371), Expect = e-155
 Identities = 269/530 (50%), Positives = 366/530 (69%), Gaps = 4/530 (0%)

Query: 1   MSDIPNQVRRRRTFAIISHPDAGKTTLTEKLLLFSGAINIAGSVKARKAARHATSDWMEI 60
           MS    +V +RRTFAIISHPDAGKTT+TEK+LLF  A+  AG+VK +K+ +HA SDWME+
Sbjct: 1   MSGYTVEVDKRRTFAIISHPDAGKTTITEKVLLFGQALQKAGTVKGKKSGQHAKSDWMEM 60

Query: 61  EKQRGISVASSVMQMEYRDCVINLLDTPGHQDFSEDTYRVLTAVDAALMVIDAGNGVEPQ 120
           EK RGIS+ +SVMQ  YR+ ++NLLDTPGH+DFSEDTYR LTAVD+ LMVID+  GVE +
Sbjct: 61  EKDRGISITTSVMQFPYREALVNLLDTPGHEDFSEDTYRTLTAVDSCLMVIDSAKGVEQR 120

Query: 121 TRRLLQVCRARNTPILTFVNKMDREVQAPLDLMDEIERELGMTVVPFTWPVGMGKTFRGV 180
           T +L++V R R+TPI+TF+NK+DR+++ P++LMDE+E  L +   P TWP+G GK F+GV
Sbjct: 121 TIKLMEVTRLRDTPIVTFMNKLDRDIRDPIELMDEVENILNIACAPITWPIGAGKEFKGV 180

Query: 181 FDRRTDQMRVFAAGEDRRGGDEDVLAGLDNPESLKRFGAEFEQARDELELVAGASPAFEE 240
           +    D++ ++  G      D  V+ GLDNPE  +  G+  +  RDE+ELV GAS  F+ 
Sbjct: 181 YHLLRDEVILYQNGMGHTIQDSRVIKGLDNPELDEAIGSYAQDLRDEMELVLGASHEFDL 240

Query: 241 DKFLAGQQTPMLFGSAVNNFGVREVLDALVDLAPPPGERPAIQRTVKPEETKFSGVVFKI 300
           + FL G+ TP+ FG+A+ NFGV  +LD +V+ AP P  R + QR V+P+E+KFSG VFKI
Sbjct: 241 EAFLKGELTPVFFGTALGNFGVDHILDGIVEWAPRPQPRESDQRNVEPDESKFSGFVFKI 300

Query: 301 QANMDPAHRDRIAFVRVASGHFERGMKLKVVRSGKDLRPNTVVSFLSQRRELLDEAFAGD 360
           QANMDP HRDR+AF+RV SG +E+GMK+  VR GKD+  +  ++F++  R   + A+ GD
Sbjct: 301 QANMDPKHRDRVAFMRVCSGRYEQGMKMHHVRIGKDVNVSDALTFMAGDRNRAEAAYPGD 360

Query: 361 IIGIPNHGVLQLGDTLTEGESLQFTGLPFFAPEIIRSVEVADPLRSKQLRAGLTQLGEEG 420
           IIG+ NHG +++GDT T+GE L+FTG+P FAPE+ R + + DPL+ KQL  GL QL EEG
Sbjct: 361 IIGLHNHGTIRIGDTFTQGEKLRFTGVPNFAPEMFRRIRLKDPLKQKQLLKGLVQLSEEG 420

Query: 421 AIQVFRPVAGSVLLLGAVGQLQFEVVAHRLEHEYGVKARIMNSPYQVARWVTCAPEDGGE 480
           A+QVFRP+  + L++GAVG LQFEVV  RL+ EY V+A         ARWV         
Sbjct: 421 AVQVFRPLDSNDLIVGAVGVLQFEVVVQRLKSEYKVEAIYEAISVATARWVYSKDAK--- 477

Query: 481 VELKRFIDANSHRVALDAVDAPTLLVDHAATLRAVEANWPKIKFHAMREH 530
            +L+ F    S+ +ALD  D  T +      L      +P I+F   RE+
Sbjct: 478 -KLEEFKRKCSNNLALDGGDNLTYVAPTMVNLNLSMERYPDIEFAKTREN 526