Pairwise Alignments

Query, 356 a.a., Autolysin sensor kinase (EC 2.7.3.-) from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 603 a.a., signal transduction histidine kinase, LytS (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  110 bits (276), Expect = 7e-29
 Identities = 54/137 (39%), Positives = 84/137 (61%)

Query: 169 ATARLAELQARIRPHFLFNTLNSAIALVREEPAKAENLLEDLSELFRHALADAKEAVPLW 228
           A A +  LQA+I PHFLFN+LN+  +  R  P +A +L+ DL+   R  L  ++ A+ L 
Sbjct: 369 ARAEIRRLQAQINPHFLFNSLNAVASFCRTAPGQARDLILDLARYMRRNLDSSRGAIRLS 428

Query: 229 QELELAEHYLAIEQVRFGERLKVEWSVDEAASKAKLPPLILQPLVENAVKHGVEPSASGA 288
           +ELE    YL IEQ RFG+R++ +  +    +   +PPL++QPLVEN+V+HG+     G 
Sbjct: 429 EELEQVRSYLVIEQARFGDRIRADIDLAPGTADWLIPPLLIQPLVENSVRHGILAREEGG 488

Query: 289 VVRISTQRRGSVVVIKV 305
           +VR+S    G  +++ V
Sbjct: 489 LVRLSAHADGDHLLVTV 505



 Score = 26.9 bits (58), Expect = 0.001
 Identities = 30/109 (27%), Positives = 42/109 (38%), Gaps = 22/109 (20%)

Query: 37  QVFDTCQVGTVLRAVLFVQAIVSVAA---------LFGAQTFVAWITQLAIYTGAALPAV 87
           Q F   +   V+ A LF   +V   A         L     F A    LA  +   L  +
Sbjct: 73  QSFANLRAMGVITAGLFGGPVVGAGAGIIAAGHRYLIDVGGFSALPCGLATLSEGILAGL 132

Query: 88  LAWLLTVCGLKRQLGLLPMPGQWAAAIGFGALSGLYGCGLLVWMGLAEP 136
           +AW       +R+L        WA A+  G +   Y  GL++W  LAEP
Sbjct: 133 VAWRFP----ERRL-------DWATALTLGLIGETYHMGLVLW--LAEP 168