Pairwise Alignments

Query, 344 a.a., TRAP-type transport system, periplasmic component, predicted N-acetylneuraminate-binding protein from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 338 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

 Score =  153 bits (387), Expect = 5e-42
 Identities = 88/294 (29%), Positives = 160/294 (54%), Gaps = 7/294 (2%)

Query: 51  EIWSNLVRERTQGRINIKLYPGVSLLQGDQTREFSGLRQGVIDLAVGSTINWSPQVRQLN 110
           E ++ LV+E++ G+I +KL+PG +L  G   +  S L+ GVI++ V +    +  V++  
Sbjct: 50  EKFAELVKEKSGGKIEVKLFPGGTL--GGDVQTVSALQGGVIEMTVLNAGILASNVKEFG 107

Query: 111 LFSMPFLMPDFAAIDALTTGEVGTQLFKDIERAGAVPLAWGENGYREISNSKHAIKTPAD 170
              +PFL       D +  G  GT L + +   G V +A+ E G+R ++N++H +    D
Sbjct: 108 AVDLPFLFDSGEEADKVMDGPFGTSLMERLPATGLVGVAYWELGFRNLTNNRHPVTKLED 167

Query: 171 LKGLKIRVVGSPLFLDTFTALGANPTQMSWADAQPAMASRAVDGQENPLSVFLAAKLPTV 230
           +KGLKIR + SP+ ++ F ALGAN   + + +   A+ +  VDGQENP +  + AK   V
Sbjct: 168 IKGLKIRTIQSPIPVELFNALGANAVPLPYTELYTALETGTVDGQENPSANIINAKFYEV 227

Query: 231 EQKHLTLWGYVADPLIFVVNKDIWASWTEADRAIVKQAAIDAGKEGKALARKGLVEPGKP 290
            QK++TL  +  +P I +V+K  W    + ++ +++QAA++A    +   RK   E    
Sbjct: 228 -QKYMTLTRHQYNPQIVLVSKKFWDGLNDEEKTVLQQAAVEA----RDFQRKVSREQDAA 282

Query: 291 LIKQLSDMGVTVTELTPEQRAEFVKVTRPVYDKWKNQIGADLVTKAEKAVAARK 344
            ++++   G+ V+EL+ E+  +     +P+ +K+   IG + V    K +   +
Sbjct: 283 ALEEIRKTGMEVSELSAEETQKLRDAVKPMIEKFSADIGQETVEALFKEIGTAR 336