Pairwise Alignments

Query, 226 a.a., Probable transmembrane protein from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 183 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score = 53.5 bits (127), Expect = 3e-12
 Identities = 49/184 (26%), Positives = 90/184 (48%), Gaps = 20/184 (10%)

Query: 32  KGRWKMLGLMLVCAAPV-IASYFMYYVVRPDGRQNYGELIDPQPALPAWTGTDAQGRAVP 90
           +G   +L L+LV   PV +A   +   +   G  N GEL+ P       T       A P
Sbjct: 7   RGAKPLLILLLVFVLPVAVAKLVLSLNLYHGGVTNKGELLPPD------TNYARLAMANP 60

Query: 91  LASLKDQWLLVSVADSACNEACVEHLYLQRQLRETLGREKDRLDWVWLRTGDAALSEPLQ 150
           +      W ++ +  S C++AC+  LY+  Q +  LGR++ R++ + L   D+ L+  LQ
Sbjct: 61  MPK---HWQMIYLLPSQCDQACMNRLYILHQSQIALGRDQHRVNPIILLQADSDLA-ALQ 116

Query: 151 KATAAAVVLQVDAQAVAGWLQPAPGQKIEDHLYVVDPLGHWMMRFPAKLDPKQAKRDLDR 210
           ++  +    Q   +A++  L         + + +VDPLG  +MR+ A+++ +QA+  L +
Sbjct: 117 ESEFSFTTAQA-TEALSQML-------TREEIIIVDPLGSLVMRY-AQVEDEQAQLMLGK 167

Query: 211 LLRA 214
            + A
Sbjct: 168 AMIA 171