Pairwise Alignments

Query, 540 a.a., Cytochrome c oxidase polypeptide I (EC 1.9.3.1) from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 531 a.a., cytochrome-c oxidase (RefSeq) from Shewanella amazonensis SB2B

 Score =  780 bits (2015), Expect = 0.0
 Identities = 360/527 (68%), Positives = 435/527 (82%), Gaps = 5/527 (0%)

Query: 8   HDAHG--HDDHDHHAPTGWRRWVYATNHKDIGTLYLLFAFTMLMVGGVLALLIRAELFQP 65
           HD H   HD+H H    G  RW+  TNHKDIGTLYL F+F M + GG +A++IRAELFQP
Sbjct: 6   HDTHQGVHDEHHHGPAKGIMRWILTTNHKDIGTLYLWFSFIMFLTGGAMAMVIRAELFQP 65

Query: 66  GLQLVNPELFNQLTTMHGLIMVFGAIMPAFVGFANWMIPLQIGASDMAFARMNNFSFWLM 125
           GLQLV P  FNQ+TT+HGLIMVFGA+MPAF G ANW+IP+ IGA DMA  RMNN+SFW++
Sbjct: 66  GLQLVEPNFFNQMTTVHGLIMVFGAVMPAFTGLANWLIPMMIGAPDMALPRMNNWSFWIL 125

Query: 126 IPAAIMLVASFFMPGGAPAAGWTLYAPLTLQMGPSMDA-GIFAMHILGASSIMGSINIIV 184
             A ++L++S FM GGAP  GWT YAPL+    P   A  +F++HI+G SSIMG+IN+IV
Sbjct: 126 PFAFLILLSSLFMEGGAPNFGWTFYAPLSTTYSPDSTALFVFSVHIMGISSIMGAINVIV 185

Query: 185 TILNMRAPGMTLMKMPMFCWTWLITAYLLIAVMPVLAGAITMTLTDRHFGTSFFNPAGGG 244
           TI+N+RAPGMT MK+P+F WTWLITA+LLIAVMPVLAG +TM LTD++FGTSFF+ AGGG
Sbjct: 186 TIVNLRAPGMTWMKLPLFVWTWLITAFLLIAVMPVLAGVVTMVLTDKYFGTSFFDAAGGG 245

Query: 245 DPVMYQHIFWFFGHPEVYIMILPAFGIVSQVVPAFARKKLFGYASMVYATGSIAILSFVV 304
           DPVM+QHIFWFFGHPEVYIMILP+FGI+S +VPAF+RKKLFGYASMVYAT SIAILSF+V
Sbjct: 246 DPVMFQHIFWFFGHPEVYIMILPSFGIISAIVPAFSRKKLFGYASMVYATASIAILSFLV 305

Query: 305 WAHHMFTTGMPVTGQLFFMYSTMLIAVPTGVKIFNWIATMWKGSMTFETPMLWAVGFIFV 364
           WAHHMFTTGMPV  +LFFMY TMLIAVPTGVK+FNW+ATMW+GSMTFETPML+A+ FI +
Sbjct: 306 WAHHMFTTGMPVFAELFFMYCTMLIAVPTGVKVFNWVATMWRGSMTFETPMLFAIAFIIL 365

Query: 365 FTIGGFTGLILSVAPIDIQMQDTYYVVAHFHYVLVAGSLFAMFSGIYYWLPKWTGVMYSE 424
           FTIGGF+GL+L++ P+D Q  DTY+VVAHFHYVLV+G++F++ +  YYWLPKWTG MY E
Sbjct: 366 FTIGGFSGLMLAITPVDFQYHDTYFVVAHFHYVLVSGAIFSIMAAAYYWLPKWTGHMYDE 425

Query: 425 TRGKIHFWWSMISFNITFFPMHFLGLAGMPRRYADYPMQFADFNAIASVGAFGFGLAQVY 484
             GK+HFW S+IS N+ FFPMHFLGLAGMPRR  DY +QFAD N I S+G F FGL+Q+ 
Sbjct: 426 KLGKLHFWCSVISVNVLFFPMHFLGLAGMPRRIPDYAIQFADVNQIVSIGGFAFGLSQL- 484

Query: 485 FFLAVVVPAMRGKGEKAPQNPWEGAVGLEWEVPSPAPFHTFENPPKL 531
            FLAVV+  +RG GE A   PWEG+ GLEW +PSPAP+H+F  PP++
Sbjct: 485 IFLAVVIKCIRG-GEPATAKPWEGSEGLEWTLPSPAPYHSFSTPPEV 530