Pairwise Alignments

Query, 540 a.a., Cytochrome c oxidase polypeptide I (EC 1.9.3.1) from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 557 a.a., cytochrome c oxidase subunit 1-beta from Phaeobacter inhibens DSM 17395

 Score =  570 bits (1468), Expect = e-167
 Identities = 286/544 (52%), Positives = 367/544 (67%), Gaps = 29/544 (5%)

Query: 11  HGHDDHDHHAPTGWRRWVYATNHKDIGTLYLLFAFTMLMVGGVLALLIRAELFQPGLQLV 70
           HGH+D        + RW  +TNHKDIG LYL+ +  +  +     + +R EL  PG+Q +
Sbjct: 9   HGHEDERGF----FTRWFMSTNHKDIGILYLIVSAIVGFISVAFTVYMRLELMDPGVQYM 64

Query: 71  -----------------NPELFNQLTTMHGLIMVFGAIMPA-FVGFANWMIPLQIGASDM 112
                            N  L+N L T HG++M+F  ++PA F GF N+ +PLQIGA DM
Sbjct: 65  CLEGARLFADASAECTPNGHLWNVLITGHGILMMFFVVIPALFGGFGNYFMPLQIGAPDM 124

Query: 113 AFARMNNFSFWLMIPAAIMLVASFFMPGGAPAAG----WTLYAPL-TLQMGPSMDAGIFA 167
           AF RMNN SFW+ +    + VAS   PGG   AG    W LY PL T + G SMD  IFA
Sbjct: 125 AFPRMNNLSFWMYVAGTSLAVASVLAPGGNDQAGSGVGWVLYPPLSTNEGGFSMDLAIFA 184

Query: 168 MHILGASSIMGSINIIVTILNMRAPGMTLMKMPMFCWTWLITAYLLIAVMPVLAGAITMT 227
           +H+ GASSI+G+IN+I T LNMRAPGMTL K+P+F W+  +T++L++  +PVLAGAITM 
Sbjct: 185 VHVSGASSILGAINMITTFLNMRAPGMTLFKVPLFSWSIFVTSWLILLSLPVLAGAITML 244

Query: 228 LTDRHFGTSFFNPAGGGDPVMYQHIFWFFGHPEVYIMILPAFGIVSQVVPAFARKKLFGY 287
           L DR+FG +FF+PAGGGDP++YQHI WFFGHPEVYI+ILP FGI+S V+  FARK +FGY
Sbjct: 245 LMDRNFGFTFFDPAGGGDPILYQHILWFFGHPEVYIVILPGFGIISHVIATFARKPVFGY 304

Query: 288 ASMVYATGSIAILSFVVWAHHMFTTGMPVTGQLFFMYSTMLIAVPTGVKIFNWIATMWKG 347
             MV+A  +I +L FVVWAHHM+T GM +  Q +FM +TM+IAVPTGVK+F+WIATMW G
Sbjct: 305 LPMVWAIIAIGVLGFVVWAHHMYTVGMSLNQQAYFMLATMVIAVPTGVKVFSWIATMWGG 364

Query: 348 SMTFETPMLWAVGFIFVFTIGGFTGLILSVAPIDIQMQDTYYVVAHFHYVLVAGSLFAMF 407
           S+ F+ PM++A GF+F+FT+GG TG++LS A +D    DTYYVVAHFHYV+  G++FA+F
Sbjct: 365 SIEFKAPMMFAFGFLFLFTVGGVTGVVLSQASVDRAYHDTYYVVAHFHYVMSLGAVFAIF 424

Query: 408 SGIYYWLPKWTGVMYSETRGKIHFWWSMISFNITFFPMHFLGLAGMPRRYADYPMQFADF 467
           SGIY++  K TG  Y+E   +IHFW   I  N+TFFP HFLG  GMPRRY DYP  FA +
Sbjct: 425 SGIYFYFGKMTGRQYNELGAQIHFWMFFIGANLTFFPQHFLGRQGMPRRYIDYPEGFAYW 484

Query: 468 NAIASVGAFGFGLAQVYFFLAVVVPAMRGKGEKAPQNPW-EGAVGLEWEVPSPAPFHTFE 526
           N I+S GAF    A    F  VV+ ++         N W E A  LEW +PSP P HTFE
Sbjct: 485 NKISSYGAF-LSFASFLLFFGVVIYSLLRGARITQNNYWNEYADTLEWTLPSPPPEHTFE 543

Query: 527 NPPK 530
             PK
Sbjct: 544 ILPK 547