Pairwise Alignments

Query, 540 a.a., Cytochrome c oxidase polypeptide I (EC 1.9.3.1) from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 541 a.a., cytochrome c oxidase, subunit I (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  469 bits (1206), Expect = e-136
 Identities = 220/527 (41%), Positives = 327/527 (62%), Gaps = 11/527 (2%)

Query: 9   DAHGHDDHDHHAPT---GWRRWVYATNHKDIGTLYLLFAFTMLMVGGVLALLIRAELFQP 65
           DAH H +     P    G   W+++T+HK IG LYL     M +VG  L  LIR EL  P
Sbjct: 4   DAHDHPNFFQPLPGTKGGIASWIFSTDHKRIGMLYLYCIVAMFLVGLTLGFLIRLELIAP 63

Query: 66  GLQLVNPELFNQLTTMHGLIMVFGAIMPAF-VGFANWMIPLQIGASDMAFARMNNFSFWL 124
           G  ++  + +N L T+HG++M+F  ++P+    F N  +P+QIGA D++F R+N FS+WL
Sbjct: 64  GRTIMGQQTYNALFTLHGVVMIFLVVIPSIPAAFGNIFLPIQIGAEDVSFPRLNIFSWWL 123

Query: 125 MIPAAIMLVASFFMPGGAPAAGWTLYAPLTLQMGPSMDAGIFAMHILGASSIMGSINIIV 184
            +  A++ V S     GAP  GWT Y P +     ++D  + A+ ILG SSI+  +N I 
Sbjct: 124 YVTGAVLAVVSLVTGKGAPDTGWTFYVPFSAVTTTNVDVAVVAVFILGFSSILTGLNFIT 183

Query: 185 TILNMRAPGMTLMKMPMFCWTWLITAYLLIAVMPVLAGAITMTLTDRHFGTSFFNPAGGG 244
           T+  +RAPGMT  ++P+FCW+   T ++ +   PVL   + +   +R  G   F+P+ GG
Sbjct: 184 TLHRLRAPGMTWTRLPLFCWSLYATGWIQVLATPVLGITVLLIFVERVLGVGLFDPSRGG 243

Query: 245 DPVMYQHIFWFFGHPEVYIMILPAFGIVSQVVPAFARKKLFGYASMVYATGSIAILSFVV 304
           DP++YQH+FW + HP VYIMILPA G++S+++P FARK +FGY  + +++ +IA    +V
Sbjct: 244 DPILYQHLFWIYSHPAVYIMILPAMGVISEILPVFARKPIFGYKMIAFSSLAIAFAGSLV 303

Query: 305 WAHHMFTTGMPVTGQLFFMYSTMLIAVPTGVKIFNWIATMWKGSMTFETPMLWAVGFIFV 364
           WAHHMF +GM  T  + F + T ++A+P+ +K+FNW++T++KGS+  E P+ +A+ FIF+
Sbjct: 304 WAHHMFVSGMSDTAVMVFSFLTFVVAIPSAIKVFNWVSTLYKGSIRVEPPLWYALAFIFL 363

Query: 365 FTIGGFTGLILSVAPIDIQMQDTYYVVAHFHYVLVAGSLFAMFSGIYYWLPKWTGVMYSE 424
           F+IGG TGL+L  A  D+ + DTY+VVAHFHYV+  G  F +F  ++YW PK  G MY +
Sbjct: 364 FSIGGLTGLVLGAAGTDVHVHDTYFVVAHFHYVIFGGLGFGLFGAMHYWFPKVYGRMYDK 423

Query: 425 TRGKIHFWWSMISFNITFFPMHFLGLAGMPRRYADYPMQFADFNAIASVGAFGFGLAQVY 484
                    + + FNI +FPM  LGL GMPRRY DY  ++A+ + I+++G++      + 
Sbjct: 424 RIANWSCLVAFVGFNILYFPMFILGLQGMPRRYYDYLPKYAEGHFISTMGSWVLATGLLL 483

Query: 485 FFLAVVVPAMRG--KGEKAPQNPWEGAVGLEWEVPSPAPFHTFENPP 529
            F  +     RG   G+   +NPW GA  LEW VPSP P H FE  P
Sbjct: 484 MFWNL----WRGIRHGKPVGRNPW-GAATLEWTVPSPPPHHNFEAEP 525