Pairwise Alignments

Query, 540 a.a., Cytochrome c oxidase polypeptide I (EC 1.9.3.1) from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 633 a.a., cytochrome C oxidase from Herbaspirillum seropedicae SmR1

 Score =  459 bits (1181), Expect = e-133
 Identities = 220/518 (42%), Positives = 323/518 (62%), Gaps = 9/518 (1%)

Query: 21  PTGWRRWVYATNHKDIGTLYLLFAFTMLMVGGVLALLIRAELFQPGLQLVNPELFNQLTT 80
           P G   W+ A NHK I   +++  F   ++GG+LAL +R +L +P  +L+   L+NQL T
Sbjct: 20  PPGLWGWLCAVNHKAIARRFMVTTFVFFLLGGMLALAMRLQLARPDAELIGARLYNQLFT 79

Query: 81  MHGLIMVFGAIMPAFVGFANWMIPLQIGASDMAFARMNNFSFWLMIPAAIMLVASFFMPG 140
           MHG  M+F   +P     A +++PL IGA  +AF R+N F++W+ +   ++L  +F + G
Sbjct: 80  MHGTTMMFLFAVPVMQAVAAYLLPLMIGARSVAFPRLNAFAYWIFLFGGLLLYGAF-LAG 138

Query: 141 GAPAAGWTLYAPLTLQ---MGPSMDAGIFAMHILGASSIMGSINIIVTILNMRAPGMTLM 197
             P  GW  Y PL L     G  +D     +     S+++ +I II T++ +RAPGM+L 
Sbjct: 139 SGPDVGWFAYVPLALNPYASGKGVDIWAQMITFTELSALIEAIVIITTVMKLRAPGMSLR 198

Query: 198 KMPMFCWTWLITAYLLIAVMPVLAGAITMTLTDRHFGTSFFNPAGGGDPVMYQHIFWFFG 257
           +MP+F W  L+T+ +++  MP +  A T  +TDR   T F++   GGD +++QH+FWFFG
Sbjct: 199 RMPLFAWAMLVTSVMVLFAMPAVMLASTGLITDRLVNTQFYSHQNGGDALLWQHLFWFFG 258

Query: 258 HPEVYIMILPAFGIVSQVVPAFARKKLFGYASMVYATGSIAILSFVVWAHHMFTTGMPVT 317
           HPEVY++ LP  G++S ++P FAR+ + GY +MV A  + A L+F +W HHMF T +P  
Sbjct: 259 HPEVYLIFLPPLGMISTIIPTFARRSMVGYPAMVLALIATAFLAFGLWVHHMFATTLPEA 318

Query: 318 GQLFFMYSTMLIAVPTGVKIFNWIATMWKGSMTFETPMLWAVGFIFVFTIGGFTGLILSV 377
           G+LFF  +++LIA+PT ++IF WI+T+W G   F+TP+L+ + F F+  +GG TGL+L+ 
Sbjct: 319 GKLFFTAASLLIALPTALQIFCWISTIWLGRPVFKTPLLFVLAFFFILVMGGLTGLMLAS 378

Query: 378 APIDIQMQDTYYVVAHFHYVLVAGSLFAMFSGIYYWLPKWTGVMYSETRGKIHFWWSMIS 437
            P+D+Q+ DTY+VVAH HYVL+ G++F +F G YYW PK+TG M  E  G+ +FW   + 
Sbjct: 379 VPLDLQLHDTYFVVAHLHYVLLGGAIFPLFGGFYYWFPKFTGRMLDERLGRWNFWLFFVG 438

Query: 438 FNITFFPMHFLGLAGMPRRYADYPMQ--FADFNAIASVGAFGFGLAQVYFFLAVVVPAMR 495
           FN+ FFPMH LGL GM RR   Y  Q  +   N  A++GAF  GL+ + F L VV    R
Sbjct: 439 FNVCFFPMHVLGLQGMTRRVYTYAAQMGWEGLNLTATIGAFLIGLSVLLFLLNVVHSLWR 498

Query: 496 GKGEKAPQNPWEGAVGLEWEVPSPAPFHTFENPPKLDA 533
           G    A  NPW GA  LEW +PSP P   F   P + A
Sbjct: 499 GAA--AGDNPW-GAATLEWSLPSPPPAGNFLEVPVVHA 533