Pairwise Alignments

Query, 540 a.a., Cytochrome c oxidase polypeptide I (EC 1.9.3.1) from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 558 a.a., Cytochrome c oxidase subunit I type (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  587 bits (1513), Expect = e-172
 Identities = 294/547 (53%), Positives = 371/547 (67%), Gaps = 30/547 (5%)

Query: 11  HGHDDHDHHAPTGWRRWVYATNHKDIGTLYLLFAFTMLMVGGVLALLIRAELFQPGLQLV 70
           HGH+D        + RW  +TNHKDIG LY+L A     +     + +R EL  PG+Q +
Sbjct: 9   HGHEDTRGF----FTRWFMSTNHKDIGILYILVAGLAGFISVAFTVYMRMELMNPGVQYM 64

Query: 71  ------------------NPELFNQLTTMHGLIMVFGAIMPA-FVGFANWMIPLQIGASD 111
                             N  L+N L T HG++M+F  ++PA F GF N+ +PL IGA D
Sbjct: 65  CTEGARFIAAGANDVCTPNGHLWNVLITGHGILMMFFVVIPALFGGFGNYFMPLHIGAPD 124

Query: 112 MAFARMNNFSFWLMIPAAIMLVASFFMPGG----APAAGWTLYAPL-TLQMGPSMDAGIF 166
           MAF R+NN SFWL +    + +AS   PGG        GW LY PL T + G SMD  IF
Sbjct: 125 MAFPRLNNLSFWLYVAGTSLAIASVLAPGGNGQTGSGVGWVLYPPLSTTEAGFSMDLAIF 184

Query: 167 AMHILGASSIMGSINIIVTILNMRAPGMTLMKMPMFCWTWLITAYLLIAVMPVLAGAITM 226
           A+H+ GASSI+G+INII T LNMRAPGMTL K+P+F W+  +TA+L++  +PVLAGAITM
Sbjct: 185 AVHVSGASSILGAINIITTFLNMRAPGMTLFKVPLFAWSIFVTAWLILLALPVLAGAITM 244

Query: 227 TLTDRHFGTSFFNPAGGGDPVMYQHIFWFFGHPEVYIMILPAFGIVSQVVPAFARKKLFG 286
            LTDR+FGT+FF+PAGGGDPV+YQHI WFFGHPEVYI+ILPAFGI+S V+  F+RK +FG
Sbjct: 245 LLTDRNFGTTFFDPAGGGDPVLYQHILWFFGHPEVYIVILPAFGIISHVIATFSRKPVFG 304

Query: 287 YASMVYATGSIAILSFVVWAHHMFTTGMPVTGQLFFMYSTMLIAVPTGVKIFNWIATMWK 346
           Y  MV+A  +I  L FVVWAHHM+T GM +T Q +FM +TM+IAVPTGVKIF+WIATMWK
Sbjct: 305 YMPMVWAMIAIGGLGFVVWAHHMYTVGMSLTQQSYFMLATMVIAVPTGVKIFSWIATMWK 364

Query: 347 GSMTFETPMLWAVGFIFVFTIGGFTGLILSVAPIDIQMQDTYYVVAHFHYVLVAGSLFAM 406
           GS+TFETPML+A+GF+F+FT+GG TG++LS A +D    DTYYVVAHFHYV+  G++F +
Sbjct: 365 GSLTFETPMLFAIGFLFLFTVGGVTGIVLSQAGVDRAYHDTYYVVAHFHYVMSLGAVFGI 424

Query: 407 FSGIYYWLPKWTGVMYSETRGKIHFWWSMISFNITFFPMHFLGLAGMPRRYADYPMQFAD 466
           F+GIY+W+ K +G  Y E  GK+HFW   I  NITFFP HFLG  GMPRRY DYP  F  
Sbjct: 425 FAGIYFWIGKMSGRQYPEWAGKVHFWTFFIGTNITFFPQHFLGRQGMPRRYIDYPEAFGL 484

Query: 467 FNAIASVGAFGFGLAQVYFFLAVVVPAMRGKGEKAPQNPW-EGAVGLEWEVPSPAPFHTF 525
           +N ++S GAF    A   FF+ VV   +        +N W E A  LEW +P+P P HTF
Sbjct: 485 WNWVSSWGAF-LSFASFLFFIGVVFYTITRGKRVEEENYWNEHADTLEWTLPNPPPEHTF 543

Query: 526 ENPPKLD 532
           E  P  D
Sbjct: 544 EQLPTRD 550