Pairwise Alignments

Query, 540 a.a., Cytochrome c oxidase polypeptide I (EC 1.9.3.1) from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 530 a.a., cytochrome c oxidase, subunit I (RefSeq) from Shewanella sp. ANA-3

 Score =  774 bits (1999), Expect = 0.0
 Identities = 357/520 (68%), Positives = 430/520 (82%), Gaps = 3/520 (0%)

Query: 13  HDDHDHHAPTGWRRWVYATNHKDIGTLYLLFAFTMLMVGGVLALLIRAELFQPGLQLVNP 72
           HD+H H AP G  RW+  TNHKDIGTLYL F+F M + GG +A++IRAELFQPGLQLV P
Sbjct: 12  HDEHHHGAPKGIMRWLLTTNHKDIGTLYLWFSFIMFLTGGAMAMVIRAELFQPGLQLVEP 71

Query: 73  ELFNQLTTMHGLIMVFGAIMPAFVGFANWMIPLQIGASDMAFARMNNFSFWLMIPAAIML 132
             FNQ+TT+HGLIMVFGA+MPAF G ANW+IP+ IGA DMA  RMNN+SFW++  A  +L
Sbjct: 72  NFFNQMTTVHGLIMVFGAVMPAFTGLANWLIPMMIGAPDMALPRMNNWSFWILPFAFTIL 131

Query: 133 VASFFMPGGAPAAGWTLYAPLTLQMGPSMDA-GIFAMHILGASSIMGSINIIVTILNMRA 191
           ++S FM GG P  GWT YAPL+    P   A  +F++HI+G SSIMG+IN+IVTI+N+RA
Sbjct: 132 LSSLFMEGGGPNFGWTFYAPLSTTYSPDSTALFVFSIHIMGISSIMGAINVIVTIVNLRA 191

Query: 192 PGMTLMKMPMFCWTWLITAYLLIAVMPVLAGAITMTLTDRHFGTSFFNPAGGGDPVMYQH 251
           PGMT MK+P+F WTWLITA+LLIAVMPVLAGA+TM LTD+ FGTSFF  AGGGDPVM+QH
Sbjct: 192 PGMTWMKLPLFVWTWLITAFLLIAVMPVLAGAVTMVLTDKFFGTSFFEAAGGGDPVMFQH 251

Query: 252 IFWFFGHPEVYIMILPAFGIVSQVVPAFARKKLFGYASMVYATGSIAILSFVVWAHHMFT 311
           IFWFFGHPEVYIMILP+FGI+S +VPAF+RKKLFGY+SMVYAT SIAILSF+VWAHHMFT
Sbjct: 252 IFWFFGHPEVYIMILPSFGIISAIVPAFSRKKLFGYSSMVYATASIAILSFLVWAHHMFT 311

Query: 312 TGMPVTGQLFFMYSTMLIAVPTGVKIFNWIATMWKGSMTFETPMLWAVGFIFVFTIGGFT 371
           TGMPV  +LFFMY TMLIAVPTGVK+FNW+ATMW+GS++FETPML+AV FI +FTIGGF+
Sbjct: 312 TGMPVFAELFFMYCTMLIAVPTGVKVFNWVATMWRGSLSFETPMLFAVAFIILFTIGGFS 371

Query: 372 GLILSVAPIDIQMQDTYYVVAHFHYVLVAGSLFAMFSGIYYWLPKWTGVMYSETRGKIHF 431
           GL+L++ P D Q  DTY+VVAHFHYVLV G++F++ +  YYWLPKWTG MYSE  G+ HF
Sbjct: 372 GLMLAITPADFQYHDTYFVVAHFHYVLVTGAIFSIMAAAYYWLPKWTGHMYSEKLGQWHF 431

Query: 432 WWSMISFNITFFPMHFLGLAGMPRRYADYPMQFADFNAIASVGAFGFGLAQVYFFLAVVV 491
           W S+IS N+ FFPMHFLGLAGMPRR  DY +QFAD N I S+G F FGL+Q+  FL +V+
Sbjct: 432 WCSVISVNVLFFPMHFLGLAGMPRRIPDYSIQFADVNQIVSIGGFAFGLSQL-IFLVLVI 490

Query: 492 PAMRGKGEKAPQNPWEGAVGLEWEVPSPAPFHTFENPPKL 531
             +RG GEKAP  PWEG+ GLEW +PSPAP+H+F  PP++
Sbjct: 491 KCIRG-GEKAPAKPWEGSEGLEWTLPSPAPYHSFTTPPEV 529