Pairwise Alignments

Query, 395 a.a., carbon monoxide dehydrogenase E protein from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 395 a.a., hypothetical protein (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  428 bits (1100), Expect = e-124
 Identities = 216/402 (53%), Positives = 288/402 (71%), Gaps = 14/402 (3%)

Query: 1   MLIDFFYTLRSAKLPVSVKEYLTLLEALQADVVGPRNPEACSMDDFYFLARTALVKDEKH 60
           M + FF  LR   +PVSV+EYLT LE L       R       + FYFLAR A+VKDE+H
Sbjct: 1   MFLPFFAELRKGGVPVSVREYLTFLEGLG------RGMATYDPEQFYFLARCAMVKDERH 54

Query: 61  YDKFDRAFAAYFKGVEMIADF----TKPIPADWLRQEMERILSEEQKANAPKMD-WDELM 115
            D+FDRAFA  F G+E I          +P +WL +  E+ LS E++A    +  +D+LM
Sbjct: 55  LDRFDRAFATAFNGLEAITPEQVLDAVDLPREWLEKLAEKHLSPEERAEIEALGGFDKLM 114

Query: 116 ETLRKRLEEQKERHEGGSKWIGTGGTSPFGNSGQNPQGVRIG-GKGGNKSAVKVWEQRSY 174
           ETL++RL++Q+ RH+GGSKWIGT GTSPFG  G NP+GVRIG  +  +K AVKVW++R +
Sbjct: 115 ETLKERLKDQQGRHQGGSKWIGTAGTSPFGAYGYNPEGVRIGQNESRHKRAVKVWDKREF 174

Query: 175 RDYDDTQELGTRNIKVALRRLRKFAREGNDLELDLPDTIRATAANAGYLDIKMIPERHNN 234
           R+ DD+ ELGTRNIKVAL+RLR++AR+G   ELDL  TIRATA + GYLD+K  PER N 
Sbjct: 175 RNLDDSVELGTRNIKVALKRLRQWARDGAAEELDLDGTIRATAEH-GYLDVKTRPERRNA 233

Query: 235 VKVLLLMDVGGTMDEHIQRVEELFSAVKSEFKHLEFYYFHNCVYDFMWKNNRRRYAEKFP 294
           VKVLL +DVGG+MD +I+ VEELFSA ++EFKHLE++YFHNC+Y+ +W++NRRR++E+ P
Sbjct: 234 VKVLLFLDVGGSMDPYIRLVEELFSAARAEFKHLEYFYFHNCIYEGLWRDNRRRWSEQTP 293

Query: 295 TWDIIRKYNKDYKLIFVGDATMSPYEILQPGGSVEYNNEEAGAEWLQRLTHAFPKFAWIN 354
           TWD++  Y  DYK I VGDA+MSPYEI  PGG+ E+ N EAG  WL R+   +P   W+N
Sbjct: 294 TWDVLHTYGSDYKCIIVGDASMSPYEIAHPGGANEHWNPEAGHVWLARVRDQWPNHLWLN 353

Query: 355 PEPQGVWQYRQSISVIQQLMG-QRMYPLTLKGLEDTMRLLSK 395
           P P+  W+Y  SI +IQQ+ G +RM P+TL+G++  MR+L +
Sbjct: 354 PVPERHWRYTHSIEMIQQVFGAERMVPMTLEGIDRGMRVLGR 395