Pairwise Alignments

Query, 344 a.a., tRNA dihydrouridine synthase B (EC 1.-.-.-) from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 337 a.a., tRNA-dihydrouridine synthase DusB from Phaeobacter inhibens DSM 17395

 Score =  249 bits (636), Expect = 7e-71
 Identities = 135/294 (45%), Positives = 181/294 (61%), Gaps = 3/294 (1%)

Query: 3   LGAFTLPNALFVAPMAGVTDRPFRKLCKRLGAGYAVSEMVTSRPDLQDSLKTSRRANHEG 62
           LG+ +L   + +APMAG+TDRPFR L +  GAG  VSEMV S+  +Q       RA    
Sbjct: 5   LGSTSLTPPIALAPMAGITDRPFRDLVRSFGAGLMVSEMVASQEMVQAKPGVRERAELSA 64

Query: 63  EAAPISVQIAGTDAQMMADAARYNIDRGAQIIDINMGCPAKKVCNKWAGSALMQDEALAI 122
           +    +VQIAG DA  MA+AAR    RGA++IDINMGCPAKKV N ++GSAL++    A+
Sbjct: 65  DVENTAVQIAGRDAYWMAEAARQVESRGAKVIDINMGCPAKKVTNGYSGSALLKTPDHAL 124

Query: 123 EIVQAVVAACEPHGVPVTLKMRTGWCASVRNAPTLALAAEAAGVQMLTVHGRTREQGYKG 182
            +++AVVAA     VPVTLK R GW  +  NA  +A  A+ AGVQM+T+HGRTR Q YKG
Sbjct: 125 SLIEAVVAAVS---VPVTLKTRLGWDDNSLNAADVARRAQDAGVQMVTIHGRTRCQFYKG 181

Query: 183 QAEHDTVAHIKSRVRIPVVANGDIDSPEQAREVLRRTGADAIMVGRAAQGRPWIFREIAH 242
            A+   +A +K+ + +P++ANGDI     AR  L ++GAD +M+GR  QG+PW+  E+AH
Sbjct: 182 TADWKAIAAVKTALNVPLLANGDIVDTATARTALAQSGADGVMIGRGVQGKPWLLAEVAH 241

Query: 243 FLATGEHLPPPDLADVRVWLLDHLHDHYDLYGEDTGVRSARKHLGWYAQSLPLP 296
            +        P  +D+   +  H       YG D G+R ARKHLGWY      P
Sbjct: 242 DIWGSAAPEVPTGSDLVQMVSAHYEAMIAFYGTDLGLRVARKHLGWYMDEAATP 295