Pairwise Alignments

Query, 604 a.a., protease, putative from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 587 a.a., PDZ/DHR/GLGF from Synechococcus elongatus PCC 7942

 Score =  314 bits (804), Expect = 8e-90
 Identities = 195/531 (36%), Positives = 284/531 (53%), Gaps = 33/531 (6%)

Query: 5   AKAARAARTAAAVRCTVSVLSAHAHLFAVTLRIEQ-PAKNQRVALPVWIPGSYLVREFSQ 63
           A A   A  A+ +   V++ +   HLF VTL+I    ++   V +P W PGSYL+RE+++
Sbjct: 6   AAADSLAIAASGLTYRVALPNPSNHLFEVTLQISDWQSEIVTVQMPAWTPGSYLLREYAR 65

Query: 64  NLQQLRAWQ-NGQPIALKQLDKHRWQAQAAAGEPLELRYEVYAFDASVRTAFLDASRGFF 122
           +LQ  RA    GQP+  ++L K+ WQ +      + + Y+V A + +VRT  LD S GFF
Sbjct: 66  HLQNFRAQTATGQPLLWRKLRKNAWQIETQEHSEIYISYQVLATELTVRTNHLDRSHGFF 125

Query: 123 NATSLCLRVLGQEDLPHALELVSGKATAGWQVATGLTPQAVDDQGFGHYLAEGYDELADC 182
              +LCL +    D P  +E+   KA  GW VAT L   A        + A  +D L D 
Sbjct: 126 TPAALCLYIDAWRDRPCQVEI---KAPEGWNVATALPAIA-----HNCFRAADFDTLVDS 177

Query: 183 PVEMGRFWSASFTAGGVEHRFVVAGAGEWMDGERLIEDTRKICETQIAFWHGQQPPPFSR 242
           P E+G   +  FT  G +H +   G    +D +RL+ DT ++ ET+ A + G    P+  
Sbjct: 178 PFEIGPEGTQEFTVLGKKHYWRTWGGN--LDSDRLLADTARLIETEAAIFGGL---PYDH 232

Query: 243 YVFMLYASADGYGGLEHRNSTALICQRADLPRAPAPGDKPAALKATDGYTTLLGLISHEY 302
           Y F+L+ S+ GYGGLEHR+ST L   R              A+   +GY   L L++HE+
Sbjct: 233 YWFILHLSSGGYGGLEHRDSTVLAFDRQ-------------AITEPEGYRRFLQLVAHEF 279

Query: 303 FHTWNVKRLRPAEFARYDYDTENHTELLWFFEGFTSYYDDLMLRRAGLIDEATYLQLVAK 362
           FH WNVKR+RP    ++DY+ EN+T  LWF EG TSYYD L+  RAGL    ++L+ + K
Sbjct: 280 FHLWNVKRIRPKALEQFDYEAENYTPSLWFSEGATSYYDLLLPLRAGLYGVDSFLEALGK 339

Query: 363 TLNQVQQTPGRLVQTVAEASFDAWVKYYRMNENTPNATVSYYTKGSLVAMCLDLTLR-AE 421
            L++   TPGR VQ +AE+SFDAWVK YR +  + N  +SYY KG LV   LDL +R  +
Sbjct: 340 DLSRYLTTPGRKVQPLAESSFDAWVKLYRRDAYSDNQQMSYYLKGQLVCWLLDLEIRNHQ 399

Query: 422 GHSSLDAVMRELWQRCEGGP---MREADVLRALKRLGRRSYEGEIAAWVHSTDELPLPSL 478
              S D V+R LWQR   GP     EA++ +    +           +V   +ELP+ + 
Sbjct: 400 PDRSFDDVLRLLWQRHGQGPEIGFEEAELRQIFSEVAGVDLTDFFERYVDGLEELPIAAA 459

Query: 479 LQNHGVKVAHDKAPLAQQLGLRVSEAGGGVVLKTVLRGGAAEAAGMAANDE 529
           + + G+++           GLR+++  G   +K V     AE AG+   DE
Sbjct: 460 VDSLGLQLLPQGCDRPSH-GLRLADEQGRCQIKFVASDSPAEQAGLMIGDE 509