Pairwise Alignments

Query, 604 a.a., protease, putative from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 633 a.a., Predicted protease with the C-terminal PDZ domain from Sphingomonas koreensis DSMZ 15582

 Score = 87.4 bits (215), Expect = 2e-21
 Identities = 107/473 (22%), Positives = 178/473 (37%), Gaps = 59/473 (12%)

Query: 48  LPVWIPGSYLVREFSQNLQQLRAWQNGQPIALKQLDKHRWQAQA---AAGEPLELRYEVY 104
           +P W+PG +  R   + L  L+    G+ +  K+     W          + L+L ++  
Sbjct: 76  MPAWLPGKHAARGEVEKLAGLKISAGGKAVPWKRDTVDVWAFHVDVPRGAKQLDLEFQFT 135

Query: 105 AFDAS------VRTAFLDASRGFFNATSLCLRVLGQEDLPHALELVSGKATAGWQVATGL 158
              AS      +  A L+     F   SL         +P    +   +   GW   +GL
Sbjct: 136 GATASDQGRVSIAPAMLNLQ---FEQVSLYPAGWFTRRIPIQATVTYPE---GWTAVSGL 189

Query: 159 TPQAVDDQGFGHYLAEGYDELADCPVEMGRFWSASFTAGGVEHRFVVAGAGEWMDGERLI 218
              A    G   Y    Y+ L D PV  GR +     +  V+         E       I
Sbjct: 190 P--AKKQGGSYVYDKTDYETLIDSPVFAGRNYREFKLSDRVDLNVFADDPKELEAKPEQI 247

Query: 219 EDTRKICETQIAFWHGQQPPPFSRYVFMLYASADGYG-GLEHRNSTALICQRADLPRAPA 277
           E  RK+ E  +  +  Q    + RY F+L  S +  G GLEH  S+              
Sbjct: 248 EAHRKLVEQSVKLFGAQH---YDRYEFLLSISDEMGGIGLEHHRSSE------------- 291

Query: 278 PGDKPAALKATDGYTTLLGLISHEYFHTWNVKRLRPAEFARYDYDTENHTELLWFFEGFT 337
            G KP      +       L+ HE+ H+WN K  R A+    D+ T     LLW +EG T
Sbjct: 292 NGVKPGYFTKWNDGPGSRNLLPHEFVHSWNGKFRRGADSWAPDFRTPMRNSLLWVYEGQT 351

Query: 338 SYYDDLMLRRAGLIDEATYLQLVAKTLNQVQQTPGRLVQTVAEASFD---------AWVK 388
            ++  ++  R+G++ +   L ++A     +   P R  + + + + D          W+ 
Sbjct: 352 QFWGYILQARSGIVSKQDTLDMLANIAASLDNRPARTWRALVDTTNDPIISARRPKGWLS 411

Query: 389 YYRMNENTPNATVSYYTKGSLVAMCLDLTLRAE--GHSSLDAVMRELWQRCEGG----PM 442
           + R  +        YY +G L+ + +D  LRA+  G  S+D   R  +   +G       
Sbjct: 412 WQRSED--------YYNEGLLIWLEVDSMLRAQSGGRKSMDDFARAFFGMRDGDWGVLTY 463

Query: 443 READVLRALKRLGRRSYEGEIAAWVHS-TDELPLPSLLQNHGVKVAHDKAPLA 494
           R  DV   L  +    + G +   ++  T+  PL     N G ++ +   P A
Sbjct: 464 RIEDVAATLNAIQPYDWAGFLNQRLNGLTERAPLAGFAAN-GYRLIYTDEPTA 515