Pairwise Alignments

Query, 472 a.a., Putative sensor-like histidine kinase YfhK from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 856 a.a., PAS domain S-box from Pseudomonas stutzeri RCH2

 Score =  116 bits (291), Expect = 3e-30
 Identities = 80/258 (31%), Positives = 128/258 (49%), Gaps = 7/258 (2%)

Query: 219 VPIDIPG--PSDVRRVSQQLEWLRLRLTE---LDADKARFLRHISHELKTPLASLHEGVA 273
           VP+ + G    D + ++Q++    + LTE   ++  K  F+  +SHEL+TPL S+   + 
Sbjct: 459 VPVLLRGYIQRDAQGMAQRISGTLMDLTERKRVEQMKNDFVSTVSHELRTPLTSISGALG 518

Query: 274 VLGDGVAGALNPSQAEVVTILQHNTQLLQHQIEALLRFNAAAFEARQLRRERTDLLALLE 333
           ++  G  G+   S  +++ I   N+  L H I  LL     A            L  LLE
Sbjct: 519 LIVGGALGSAPASMQQMLEIAYRNSLRLGHLINDLLDMEKIAAGKMSFELREHSLGDLLE 578

Query: 334 DQVDTQRLQWQAQSLKVRVEG-VPTTMPLDREKIASAVGNLLSNAIRFSPQGGHIRLVLL 392
           + + + +   +   ++  ++  V   + +D  ++   +GN LSNA++F+PQGG IRL   
Sbjct: 579 ESLASNQALCEQHGIRCSLDHPVDVLVWVDGMRLQQVLGNFLSNAVKFTPQGGEIRLHSS 638

Query: 393 DLPGRACIDIVDQGPGVAEADRDRIFEPFYRGERQPTGAVRGTGIGLSIVHEYILAHGGR 452
               R  I + DQGPG+ EA R R+FE F + +   +    GTG+GL+I  E I   GG 
Sbjct: 639 LRGPRVRISVTDQGPGIPEAFRSRVFEKFAQADASDSRQKSGTGLGLAITKELIERMGGT 698

Query: 453 ITL-LPQRQGAHFRIELP 469
           +    P  QG  F  ELP
Sbjct: 699 VGFDCPPGQGTTFWCELP 716