Pairwise Alignments

Query, 472 a.a., Putative sensor-like histidine kinase YfhK from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 1420 a.a., two-component system sensor histidine kinase/response regulator, hybrid ('one component system') (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 96.3 bits (238), Expect = 6e-24
 Identities = 72/254 (28%), Positives = 117/254 (46%), Gaps = 17/254 (6%)

Query: 229  VRRVSQQLEWLRLRLTELDADKARFLRHISHELKTPLASLHEGVAVLGDGVAGALNPSQA 288
            + R   QL  +  ++ EL  DK  F  +I+HE +TP+  +   +  +   +  + NP   
Sbjct: 882  ITRQKAQLIRMSRKVQELTLDKISFFTNITHEFRTPITLI---IGPIERALKLSYNPQVI 938

Query: 289  EVVTILQHNTQLLQHQIEALLRFNAAAFEARQLRRERTDLLALLEDQVDTQRLQWQAQSL 348
            E +  ++ N++ L   +  L+ F        ++ + R + L  ++  +    +  Q +++
Sbjct: 939  EQLNFVERNSKYLLSLVNQLMDFRKVESGKLEIVKTRGNFLKFIDSLITPFEVFAQERNI 998

Query: 349  KVRVEGVPTTMP---LDREKIASAVGNLLSNAIRFSPQGGHIRLVLLDLPGR------AC 399
             ++       MP    D E +   V NLLSNAI+F+P GG + L L  L  +        
Sbjct: 999  VLK-RYYRMEMPEILYDEEAMRKVVTNLLSNAIKFTPNGGTVSLYLSALFAKDSEKETLY 1057

Query: 400  IDIVDQGPGVAEADRDRIFEPFYRGERQ---PTGAVRGTGIGLSIVHEYILAHGGRITLL 456
            I + D G G+ E D +RIF  FY+ + Q   P     GTGIGL +    +  HGG I   
Sbjct: 1058 ICVKDSGSGIPEEDLNRIFNRFYQSQNQVKYPVYGQAGTGIGLYLCKRIVQMHGGEIKAF 1117

Query: 457  PQRQ-GAHFRIELP 469
              R  G  FRI LP
Sbjct: 1118 NNRHAGCSFRILLP 1131