Pairwise Alignments

Query, 600 a.a., Two-component sensor PilS from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 530 a.a., His Kinase A (phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. from Pseudomonas stutzeri RCH2

 Score =  155 bits (392), Expect = 4e-42
 Identities = 124/450 (27%), Positives = 218/450 (48%), Gaps = 42/450 (9%)

Query: 118 VGSINYTALFALPVLLASILGSLTLALAASASVTLYLLGEAALHAPLFSELSTARFLQAA 177
           +G++   A+    +LL   +G    A+AA+  +  YL    ++  P  S    ++++QA 
Sbjct: 104 IGNLLIVAVAIANILLRGRVGFFIAAVAATGLI--YLTFYLSVSRPEAS----SQYVQAG 157

Query: 178 LTGTGFFLVAVLANQLAIRLAREEALTASSQAAARAQAQVNELVIESLTVGVLVVDPHGV 237
             GT  F  A+L   L  RL   E L             +N L+++ +  G++V+DP   
Sbjct: 158 ALGTLCFAAALLVQGLTRRLQVSETLARQRAEEVANLEALNALILQRMRTGIMVLDPQER 217

Query: 238 VRSANPAAQAMLLGQVSPQAAKL------LLSARSSWQHLAHLVNETFARGEALETETTI 291
           V  AN  A   LLGQ S    +L      LL A   W+    L    F   +A+    T+
Sbjct: 218 VLLANQGA-LQLLGQDSLAGERLAPRCPDLLKALQQWRDNPTLRPRNF---KAIAGGPTL 273

Query: 292 DNEDRPSQRLHARTRLTAQSGRGAGLCVLFLEDLREVEARVRTEKLASMGRMSAAVAHEI 351
                  Q  +    L            +FLED  ++  + +  KLAS+GR++A++AHEI
Sbjct: 274 QPSFAALQHGNKLDTL------------VFLEDTSQIAQKAQQLKLASLGRLTASIAHEI 321

Query: 352 RNPLSAITQANALL--DEEVQAPAQKRLTRMIEQNAQRLSRIVDDILNVARAQPNQDTTS 409
           RNPL AI+ A  LL   EE+  P  +RL ++I+ +++R++ +++++L ++R +  +    
Sbjct: 322 RNPLGAISHAAQLLHESEELDGP-DRRLAQIIQDHSRRMNLVIENVLQLSRRRQAEPQL- 379

Query: 410 APSLPLDQTVRQIAHEWVRQSKAERILGVHAHAPAAFVGFDPEHLRRLLINLLDNALRHA 469
              L L   + +   E+ +   A++ + +     +     DP  L ++L NL+ N LR++
Sbjct: 380 ---LDLKYWLHRFVSEYRQGLNAQQTVHLETIGSSLQTRMDPNQLTQVLTNLVQNGLRYS 436

Query: 470 S---GKPSSIRLITQPSGSDHIRLSVWSDGQALEASVMRHLFEPFFSSESRSSGLGLYIC 526
               G+      + +   SD   + V  DG  +    + ++FEPFF++ES+ +GLGLY+ 
Sbjct: 437 GQQHGRAQVWLRLYREEASDLPVVEVLDDGPGIATEQLHNVFEPFFTTESKGTGLGLYLS 496

Query: 527 RELCERYGAQIAYRRTRLDQREGNEFYALI 556
           RELCE   A++ YR    ++ EG   + ++
Sbjct: 497 RELCESNQARLDYR----ERPEGGSCFRIV 522