Pairwise Alignments

Query, 501 a.a., two component, sigma54 specific, transcriptional regulator, Fis family from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 470 a.a., Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains from Pseudomonas stutzeri RCH2

 Score =  305 bits (781), Expect = 2e-87
 Identities = 192/482 (39%), Positives = 280/482 (58%), Gaps = 26/482 (5%)

Query: 10  VLVVDDEPDLRTLYELTLLREGHAVVAAPDLTQAREWLAQQRFDVLISDMRLPDGLGLDL 69
           +L+V+DE  +R+     L R  + V  A  + +A+E  +   FD+++SD+RLP   G +L
Sbjct: 4   ILIVEDETIIRSALRRLLERNQYEVSEAGSVQEAQERYSIPGFDLIVSDLRLPGAPGTEL 63

Query: 70  LRELADAQRPEKCIVITAYGSAENAVESLKAGAFDYLTKPVDLKQLRSAVTAALQSQRGS 129
           ++ LA+       +++T+Y S  +AV+S+K GA DY+ KP D  ++   V   L   + S
Sbjct: 64  IK-LAEGT---PVLIMTSYASLRSAVDSMKMGAVDYIAKPFDHDEMLQTVARILSDHQQS 119

Query: 130 PAAAANGAIVATANGNAQGDATRKPPAASSGVQALRRIVGNSPSIGQIKSRIEKVASSMA 189
            A  A  A  A+A             AA SG   +  I+G+   +  +  +I KVA + +
Sbjct: 120 AAVQAQPARSASAT------------AAGSGRDDIG-IIGHCAPMQDLFGKIRKVAPTDS 166

Query: 190 PVLILGESGTGKELVARAVHDCSHRSVGPFVAVNCGAIPENLIEAEFFGARKGAYTGATT 249
            VLI GESGTGKELVARA+H+ S R+  P ++VNC AIPE LIE+E FG  KGA+TGA+ 
Sbjct: 167 NVLIQGESGTGKELVARALHNLSRRAKAPMISVNCAAIPETLIESELFGHEKGAFTGASA 226

Query: 250 DREGYFQAARGGTLFLDEIGDLPLAMQAKLLRVIQERRVRALGGVQEEAVDVRLVSATHR 309
            R G  +AA GGTLFLDEIG+LPL  QA+LLRV+QE  +R +G VQ + VDVRL++ATHR
Sbjct: 227 GRAGLVEAADGGTLFLDEIGELPLEAQARLLRVLQEGEIRRVGSVQSQKVDVRLIAATHR 286

Query: 310 DLNALVQSGQFRQDLFYRLNVIGLRSPALRERREDLPLLVEALLARLCAESGQDVPRVSE 369
           DL  L ++GQFR+DL+YRL+VI L+ P LRER  D+  + +A LAR     G D    S 
Sbjct: 287 DLKTLAKTGQFREDLYYRLHVIALKLPPLRERGSDVLEIAKAFLARQGERMGSDDLHFSR 346

Query: 370 RALAWLQARELPGNVRELENLLQRALALSSGEALEPEDFG-ESDDEEIPTQPDALSPADG 428
            A   ++    PGNVRELEN ++RA  LS    ++ E  G + + +E+    D    +  
Sbjct: 347 DAEQAIRHYSWPGNVRELENAIERAAILSESPEIDAELLGIDIELDELDDDFDEPLGSIR 406

Query: 429 PGAPMTRPPEEIPADLQSYLDEQERQVLLKALRECDFNRTAAAARLGLNLRQMRYRIQRL 488
             A    P E++       L++  +  +L+   +     T  A +LG++ + +  R QRL
Sbjct: 407 GIANSNEPTEDLS------LEDYFQHFVLE--HQDHMTETELARKLGISRKCLWERRQRL 458

Query: 489 GI 490
           GI
Sbjct: 459 GI 460