Pairwise Alignments

Query, 501 a.a., two component, sigma54 specific, transcriptional regulator, Fis family from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 459 a.a., two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  297 bits (760), Expect = 6e-85
 Identities = 176/484 (36%), Positives = 273/484 (56%), Gaps = 37/484 (7%)

Query: 10  VLVVDDEPDLRTLYELTLLREGHAVVAAPDLTQAREWLAQQRFDVLISDMRLPDGLGLDL 69
           +LV+DDE +   + E  L   G+ V A  D      +L +   DV+++DM++P   G ++
Sbjct: 7   LLVLDDEKNYLLVLEALLTDAGYTVTALNDPETGLAFLEESEVDVIVTDMKMPKITGREV 66

Query: 70  LRELADAQRPEKCIVITAYGSAENAVESLKAGAFDYLTKPVDLKQLRSAVTAALQSQRGS 129
           L ++         +++TA+GS E+AVE +K GAFDY+TKP    +L  +V  A +  R  
Sbjct: 67  LEQVKKNWPHIPVLIMTAFGSIESAVEVMKYGAFDYITKPFSNDELLLSVHNAAELSRM- 125

Query: 130 PAAAANGAIVATANGNAQGDATRKPPAASSGVQALRRIVGNSPSIGQIKSRIEKVASSMA 189
                          + Q    R+      G   + +I+G S +I +    +++ A S +
Sbjct: 126 ---------------HRQYRVLRENLEERYG---MHQIIGKSRAIRETLGMVDRAAPSRS 167

Query: 190 PVLILGESGTGKELVARAVHDCSHRSVGPFVAVNCGAIPENLIEAEFFGARKGAYTGATT 249
            VLI GESGTGKELVARA+H  S R+ GPFV+VNC A+   ++E+E FG  KG++TGA  
Sbjct: 168 TVLISGESGTGKELVARAIHFSSPRNKGPFVSVNCMALNPGVLESELFGHEKGSFTGAVA 227

Query: 250 DREGYFQAARGGTLFLDEIGDLPLAMQAKLLRVIQERRVRALGGVQEEAVDVRLVSATHR 309
            R G F+ A GGTLFLDEIG+L   +Q KLLRV+QERR   +GG +E  VD+R+V+AT++
Sbjct: 228 MRRGRFEQAGGGTLFLDEIGELTPELQVKLLRVLQERRFERVGGTEEVEVDIRIVAATNK 287

Query: 310 DLNALVQSGQFRQDLFYRLNVIGLRSPALRERREDLPLLVEALLARLCAESGQDVPRVSE 369
           +L   V+ G FR+DLFYRLNV+ +  P LRERRED+ LLV   + +L  E+G      + 
Sbjct: 288 NLQEEVEKGNFREDLFYRLNVVHIALPPLRERREDIHLLVAHFVDKLARENGVTPKTFTP 347

Query: 370 RALAWLQARELPGNVRELENLLQRALALSSGEALEPEDFG---ESDDEEIPTQPDALSPA 426
            AL ++   E PGN+R+L+N+++R L L SG+ +  +D       ++ ++ +  D L   
Sbjct: 348 EALDYMTGYEWPGNIRQLQNVVERCLVLVSGDTIRVDDLPPELRDEESQLKSAVDLL--- 404

Query: 427 DGPGAPMTRPPEEIPADLQSYLDEQERQVLLKALRECDFNRTAAAARLGLNLRQMRYRIQ 486
                        +  DL   L+  E  ++ +AL   DF +  AA  L ++   ++Y+++
Sbjct: 405 ------------PVQLDLADTLERIEAALIRRALVRADFVQVKAAELLAISKSLLQYKLK 452

Query: 487 RLGI 490
           +  I
Sbjct: 453 KYNI 456