Pairwise Alignments

Query, 501 a.a., two component, sigma54 specific, transcriptional regulator, Fis family from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 528 a.a., two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  307 bits (787), Expect = 5e-88
 Identities = 173/397 (43%), Positives = 246/397 (61%), Gaps = 19/397 (4%)

Query: 10  VLVVDDEPDLRTLYELTLLREGHAVVAAPDLTQAREWLAQQRFDVLISDMRLPDGLGLDL 69
           +LV+DDEP  R +    +   G +V  A    +  E LAQ R +V++ DMR+P   G + 
Sbjct: 4   LLVIDDEPGHRLMVRAVMEDSGWSVEEAGSGEEGLEHLAQDRVNVVLLDMRMPGMDGQET 63

Query: 70  LRELADAQRPEKCIVITAYGSAENAVESLKAGAFDYLTKPVDLKQLRSAVTAALQSQRGS 129
           L  + +       +++TA+G+  +AV ++K GAFDYLTKP D ++L + +  A    R  
Sbjct: 64  LARIQEMYPGLPVVMLTAFGTVGSAVVAMKKGAFDYLTKPADNEELTAVLEKAWDFGR-- 121

Query: 130 PAAAANGAIVATANGNAQGDATRKPPAASSGVQALRRIVGNSPSIGQIKSRIEKVASSMA 189
                    +   N N +   +   P A         IVG S ++ +++  I +   S A
Sbjct: 122 ---------LLEENENLRRRLSDDDPTAP--------IVGASQAMCRVRDFIRQAGPSEA 164

Query: 190 PVLILGESGTGKELVARAVHDCSHRSVGPFVAVNCGAIPENLIEAEFFGARKGAYTGATT 249
            +LI+GESGTGKEL+A+ +HD S+R+  P V VNC A+P +L+E+E FG  KGA+TGA  
Sbjct: 165 TILIMGESGTGKELIAQGLHDASNRADQPLVKVNCAALPGHLLESELFGYMKGAFTGAVR 224

Query: 250 DREGYFQAARGGTLFLDEIGDLPLAMQAKLLRVIQERRVRALGGVQEEAVDVRLVSATHR 309
           D+ G FQ ARGGTLFLDEIG+LPL +Q+KLLR +QER V  LG V+   VDVR+++AT+R
Sbjct: 225 DKPGRFQLARGGTLFLDEIGELPLELQSKLLRALQERVVEPLGAVRPVPVDVRIIAATNR 284

Query: 310 DLNALVQSGQFRQDLFYRLNVIGLRSPALRERREDLPLLVEALLARLCAESGQDVPRVSE 369
           DL   V++G+FR+DLF+RLNV+ + SP LR+R EDLP+L   LL RLC ++ + +  VS 
Sbjct: 285 DLKRAVEAGEFREDLFFRLNVLEVISPPLRDRLEDLPMLAGRLLERLCRKNKKGIRSVSP 344

Query: 370 RALAWLQARELPGNVRELENLLQRALALSSGEALEPE 406
             L  L     PGNVRELEN+L+RAL LS  + L P+
Sbjct: 345 EFLDALMRYSWPGNVRELENVLERALILSRSDTLGPD 381