Pairwise Alignments

Query, 444 a.a., ATP-dependent hsl protease ATP-binding subunit HslU from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 419 a.a., ATP-dependent Clp protease, ATP-binding subunit ClpX (RefSeq) from Dinoroseobacter shibae DFL-12

 Score = 99.0 bits (245), Expect = 3e-25
 Identities = 49/101 (48%), Positives = 67/101 (66%)

Query: 5   TPQEIVSELDRFIIGQKGAKRAVAIALRNRWRRQQVDEKLRPEITPKNILMIGPTGVGKT 64
           TPQEI   LD ++IGQ  AKR +++A+ N ++R     K   E+   NIL+IGPTG GKT
Sbjct: 64  TPQEICDVLDDYVIGQSHAKRVLSVAVHNHYKRLNHAGKTDIELAKSNILLIGPTGCGKT 123

Query: 65  EIARRLARLADAPFIKVEATKFTEVGYVGKDVDSIIRDLAE 105
            +A+ LAR+ D PF   +AT  TE GYVG+DV++II  L +
Sbjct: 124 LLAQTLARILDVPFTMADATTLTEAGYVGEDVENIILKLLQ 164



 Score = 82.4 bits (202), Expect = 2e-20
 Identities = 68/213 (31%), Positives = 90/213 (42%), Gaps = 57/213 (26%)

Query: 250 QNGIVFIDEIDKVTSRSDAGGA--EVSRQGVQRDLLPLVEGTTVST-----------KYG 296
           Q GIV+IDE+DK+T +SD      +VS +GVQ+ LL ++EGT  S            ++ 
Sbjct: 174 QRGIVYIDEVDKITRKSDNPSITRDVSGEGVQQALLKIMEGTVASVPPQGGRKHPQQEFL 233

Query: 297 VVKTDHILFIASGAFH----------------------------------LARPSDL--- 319
            V T +ILFI  GAF                                      P DL   
Sbjct: 234 QVDTTNILFICGGAFAGLEKIIAQRGKGSAIGFGADVKENDTRGVGEMFGELEPEDLLKF 293

Query: 320 --IPELQGRFPIRVELQSLSVEDFEAILTQTHASLVKQYQELLATEGVTLDFAPDGIRRL 377
             IPE  GR P+   L  L  +    ILTQ   +LVKQYQ L   E   L F  D +  +
Sbjct: 294 GLIPEFVGRLPVIATLTDLDEDALVTILTQPKNALVKQYQRLFELEDAQLTFTEDALNAI 353

Query: 378 AQIAFDVNERTENIGARRLSTVMEHLLDEVSFD 410
           A  A +        GAR L +++E +L    FD
Sbjct: 354 AGRAIE-----RKTGARGLRSILEDILLNTMFD 381