Pairwise Alignments

Query, 374 a.a., C4-type zinc finger protein, DksA/TraR family from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 134 a.a., RNA polymerase-binding protein DksA from Pseudomonas stutzeri RCH2

 Score =  107 bits (266), Expect = 2e-28
 Identities = 58/132 (43%), Positives = 86/132 (65%), Gaps = 5/132 (3%)

Query: 241 LTDLDVQAMPDSEYMSDLQLAYFRRKLSQLKADMLANAGETTEHLREDTVVVP--DPADR 298
           +T+ ++ A P   YM+  Q A+FR  L + + D+ +   E  + LRE   V P  DPAD 
Sbjct: 1   MTEAELIAQPTEAYMNAEQQAFFRDLLLRQRQDLQSRIAEEFDALRE---VEPSSDPADI 57

Query: 299 ATIEEEHALELRTRDRERKLLKKIEQAIARIDSGDYGYCEETGEPIGVGRLMARPTASLS 358
            + EE+   +LR  +RE+KLL KI+ A+  I  G+YG+C ETGEPIG+ RL+ RPT +LS
Sbjct: 58  GSAEEQRQWQLRVLEREKKLLDKIDDALDAIARGEYGWCAETGEPIGLPRLLLRPTTTLS 117

Query: 359 LEAQQRRELKQK 370
           +EA+QR+E ++K
Sbjct: 118 IEAKQRQEQREK 129