Pairwise Alignments

Query, 306 a.a., Tyrosine recombinase XerD from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 298 a.a., site-specific tyrosine recombinase XerD from Escherichia coli Nissle 1917

 Score =  285 bits (730), Expect = 7e-82
 Identities = 151/291 (51%), Positives = 195/291 (67%), Gaps = 6/291 (2%)

Query: 17  FIDSLWLEEGLSRNTLDAYRRDLVLLGQWLAGHGKTLPETSEADLNQYFSDR-HAETRAT 75
           F+D+LWLE+ L+ NTL+AYRRDL ++ +WL   G TL      DL    ++R     +AT
Sbjct: 11  FLDALWLEKNLAENTLNAYRRDLSMMVEWLHHRGLTLATAQSDDLQALLAERLEGGYKAT 70

Query: 76  TANRRLTVFKRYFRWALRERVIQVDPTLRLVPARQPLRVPKTMSEAQVEALLNAPDVGTP 135
           ++ R L+  +R F++  RE+  + DP+  L   + P R+PK +SEAQVE LL AP +  P
Sbjct: 71  SSARLLSAVRRLFQYLYREKFREDDPSAHLASPKLPQRLPKDLSEAQVERLLQAPLIDQP 130

Query: 136 LGLRDRCMLELIYASGLRVSELVTLKTWHVGMNEHVLRITGKGNKERLVPFGQLAGQWLQ 195
           L LRD+ MLE++YA+GLRVSELV L    + + + V+R+ GKGNKERLVP G+ A  WL+
Sbjct: 131 LELRDKAMLEVLYATGLRVSELVGLTMSDISLRQGVVRVIGKGNKERLVPLGEEAVYWLE 190

Query: 196 RYLGQARVEILNGQQSEDLFVTSRGARAGEAMTRAMFWQLVKKYAAQAGITS-PLSPHTL 254
            YL   R  +LNG   + LF + R     + MTR  FW  +K YA  AGI S  LSPH L
Sbjct: 191 TYLEHGRPWLLNGVSIDVLFPSQR----AQQMTRQTFWHRIKHYAVLAGIDSEKLSPHVL 246

Query: 255 RHAFATHLLNHGADLRAVQMLLGHADISTTTIYTHVARERLKSIVAQHHPR 305
           RHAFATHLLNHGADLR VQMLLGH+D+STT IYTHVA ERL+ +  QHHPR
Sbjct: 247 RHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLRQLHQQHHPR 297