Pairwise Alignments

Query, 332 a.a., ABC transporter permease protein from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 303 a.a., binding-protein-dependent transport systems inner membrane component (RefSeq) from Shewanella amazonensis SB2B

 Score =  143 bits (360), Expect = 6e-39
 Identities = 88/285 (30%), Positives = 160/285 (56%), Gaps = 32/285 (11%)

Query: 54  FTLVF-----VVFFLIPLALTVMVSF-------------WNFNEYELIPGFTLRNYAAIF 95
           FTL F      +FF +P A+ + +SF             + + +  L     L NY  + 
Sbjct: 17  FTLGFPFLWLTLFFALPFAIVLKISFSTAAIAIPPYEPTFTYADQLLNVALNLGNYLLLL 76

Query: 96  EGCSTLTEHGDFCVSLSTYLSTLKFCLLVWGITLLVGFAVAYFLAFHVSSPGMQTLLFVL 155
                     D  +  + YL +LK  ++     LL+G+ +AY +A   +   MQT+L +L
Sbjct: 77  ----------DDALYYTAYLGSLKIAVVSTLGCLLLGYPMAYAIAR--APVKMQTVLLLL 124

Query: 156 CTVPFWTSNVIRMISWVPLLGRNGLVNQGLMGLGLVDEPVEWLLFSDFSVVLAFVHLYTM 215
             +P WTS +IR+ +W+ LL   GL+N  L+ LG +DEP++ +L ++ +V +  V+ Y  
Sbjct: 125 IMLPSWTSFLIRVYAWMGLLADTGLINNVLLWLGAIDEPLK-ILNTNIAVYIGIVYAYLP 183

Query: 216 FMIVPIFNSMMRIDRSLLEAASDSGASGWQTLWNVIVPLSRTGILIGSIFVITIVMGDFV 275
           FM++P++ +++++D SLLEAA+D G+    T WN+ +PLS+ G++ GS+ V    +G+FV
Sbjct: 184 FMVLPLYANLVKMDMSLLEAAADLGSRSINTFWNITLPLSKGGVIAGSMLVFIPSVGEFV 243

Query: 276 TIGVMGGQQIASVGKII-QVQTSYLQFPLAAANAVILLAVVLMII 319
              ++GG     +GK++ Q   +   +P+A+A A+++L ++++ I
Sbjct: 244 IPELLGGPDSLMIGKVLWQEFFNNRDWPVASALAIVMLGLLIIPI 288