Pairwise Alignments

Query, 332 a.a., ABC transporter permease protein from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 293 a.a., putrescine transport system permease protein PotH from Phaeobacter inhibens DSM 17395

 Score =  149 bits (375), Expect = 1e-40
 Identities = 91/272 (33%), Positives = 153/272 (56%), Gaps = 7/272 (2%)

Query: 49  WQAAPFTLVFVVFFLIPLALTVMVSFWNFNEYELIPGFTLRNYAAIFEGCSTLTEHGDFC 108
           W  A F + F + F I L+   +       +++ + G         FE  + LTE   + 
Sbjct: 13  WLLALFLVPFAIVFKISLSDAAVARPPYMPQFDWVTGIGAFLSDLDFENFTWLTEDDLYW 72

Query: 109 VSLSTYLSTLKFCLLVWGITLLVGFAVAYFLAFHVSSPGMQTLLFVLCTVPFWTSNVIRM 168
                YLS+L+  ++   +TLLVG+ +AY +A   S    +  L +L  +PFWTS +IR+
Sbjct: 73  ---KAYLSSLRIAVVSTVLTLLVGYPMAYGMARAPSE--WRPTLMMLVILPFWTSFLIRV 127

Query: 169 ISWVPLLGRNGLVNQGLMGLGLVDEPVEWLLFSDFSVVLAFVHLYTMFMIVPIFNSMMRI 228
            +W+ +L   GL+NQ L+  GL+D P+  +L ++ +V +  V+ Y  FMI+PI++++ R+
Sbjct: 128 YAWMGILSNEGLLNQFLIWAGLIDTPLT-ILNTNTAVYIGIVYTYLPFMILPIYSALERL 186

Query: 229 DRSLLEAASDSGASGWQTLWNVIVPLSRTGILIGSIFVITIVMGDFVTIGVMGGQQIASV 288
           D SL+EAA D G S  +  W V +PLSR GI+ G   V    +G+FV   ++GG     +
Sbjct: 187 DGSLIEAAEDLGCSRMEAFWLVTIPLSRAGIIAGCFLVFIPTLGEFVIPSLLGGSDTLMI 246

Query: 289 GKIIQVQ-TSYLQFPLAAANAVILLAVVLMII 319
           GK++  +  S   +P+A+A AV+LL ++++ I
Sbjct: 247 GKVLWEEFFSNRDWPVASAVAVVLLLILIVPI 278