Pairwise Alignments

Query, 685 a.a., Nitrogen regulation protein NR(I) from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 634 a.a., Fis family transcriptional regulator from Pseudomonas fluorescens FW300-N2E3

 Score =  367 bits (942), Expect = e-106
 Identities = 240/656 (36%), Positives = 350/656 (53%), Gaps = 66/656 (10%)

Query: 30  IGQAHRRSQAYGIDSTDAPDFSSPGVGLLNDAREENRFLFQHAAPVMETLYDQIVNTHSM 89
           I  + RRS ++G+      + +      L      NR L   A P ++ L ++      +
Sbjct: 37  IDASWRRSLSHGVHFNGKHELALESSASLEVLLASNRLLIDAAMPAIDYLAER-QGKEGL 95

Query: 90  VLLTSAKGLVLHSLGDTDFLEKASQVALTPGMDWSEKNKGTNAIGTALSEEEALTVHGSQ 149
           ++L +++  +L   G  D L+ +    +T G  WSE  +GTNA+GTAL E     +   +
Sbjct: 96  IILANSEATILAVEGRADRLKGSGLQDITLGACWSEAARGTNALGTALVEARPTLIDCGE 155

Query: 150 HYMDANKFLTCSCSPIFDPYGQVIGALDVTGDHRSYHQH-TLALVRMSAQMIENHMFADI 208
           HY+D     +CS  PI  P G ++G LD+T +      H + AL+ M+   IE+ +F   
Sbjct: 156 HYLDRLSDFSCSSVPIHCPQGDILGVLDLTREGPLGRAHDSTALLAMAVSQIESRVFNAS 215

Query: 209 FPKAIRIHFHTRSEFLGTLVEGIAVFSPEGRFLSANRSAQFQIGLPFSALKAHTFSSLFG 268
           FP+ I + FH+R ++L +  +G+   S  G+ L+ +  A   +    SAL  H      G
Sbjct: 216 FPEQIVLAFHSRRQYLESPWQGLLAVSLGGQILAVSTQACQLLNAERSALVGHRCEEFLG 275

Query: 269 LP----ISALFELFSGSMPTPKQLCMHNGVSVWCRVKIKAANPWSGGKPTGTAPEAGGTP 324
           +     ++ L +   GS+ T K    +  +    R   ++ N  S             TP
Sbjct: 276 VDGLQLLARLQQGGIGSLQTAKGEFFYKTL----RAPQRSINVTS-------------TP 318

Query: 325 AAATAEAVKPAGRKMQFSSLQYLDTGDPQVSAVIHKLRRVSGRDIPVMILGETGTGKDLL 384
            +  A+  KP         L+ L   + + +  +   R+    ++PV++LGETGTGK+++
Sbjct: 319 RSV-AKNPKPQ------LDLESLAGSNARYARALRMARQGLANELPVLLLGETGTGKEVI 371

Query: 385 AQAIHGDSTRSAHPFVSVNCASIPDTLIESELFGYEEGAFTGARKKGSIGKILQAHGGTL 444
           A+A+H   +R   PFV+VNCA+IP+ LIESELFGY EGAFTG+R+ G IG++ QAHGGTL
Sbjct: 372 ARALHMAGSRCDKPFVAVNCAAIPEGLIESELFGYREGAFTGSRRGGMIGRLQQAHGGTL 431

Query: 445 FLDEIGDMPKHLQARLLRVLQDRKVSPLGAGKEVEVDVTVISATHKNLKDMIARGDFRED 504
           FLDEIGDMP  LQARLLRVLQDRKV+PLGAG+E ++DV +I ATH++LK ++    FRED
Sbjct: 432 FLDEIGDMPLALQARLLRVLQDRKVAPLGAGEEQDIDVALICATHRDLKRLVEEKHFRED 491

Query: 505 LYYRLNGLVVRLPALRERTDFELVVHKILKALCEQDQQIGIAPNVMALFKRYQWPGNFRQ 564
           L+YR+NG+ V LPALRER DF  +V ++L  L      + +   +  L   Y WPGN RQ
Sbjct: 492 LFYRVNGISVMLPALRERDDFSELVTRLLDKL--DAPTVKLKGELSNLLAGYHWPGNIRQ 549

Query: 565 LHNLLRTAVVM-VGSDGVIDVAHLPDDFLDELEHAQAGDATEAALPEAFGTGTAGSAPLL 623
           L  +LRTA+ M    + V+ + HLPD  LDEL               A    T GS    
Sbjct: 550 LEMVLRTALAMREPGETVLSLEHLPDSMLDEL--------------NACERSTCGS---- 591

Query: 624 PPSPLTEVTPGDGQRLQDVTLSAMAQMLRLHKGNVSAAAKALGVSRNTIYRKKDQL 679
                          +++  L  + Q L  H GNVSA A ALG+SR T+YRK  QL
Sbjct: 592 ---------------IRENELELIRQSLDNHHGNVSATADALGISRATLYRKLKQL 632