Pairwise Alignments

Query, 324 a.a., TRAP transporter solute receptor, unknown substrate 5 from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 323 a.a., tripartite ATP-independent periplasmic transporter solute receptor, DctP family from Pseudomonas stutzeri RCH2

 Score = 64.3 bits (155), Expect = 4e-15
 Identities = 68/298 (22%), Positives = 123/298 (41%), Gaps = 28/298 (9%)

Query: 1   MKRRL------FSLSVAAATMAMSLPALAQTKWDLPAAYPATNFHTVNLTAFANDVDKAT 54
           +KR+L      F+  ++    AM+L  +A+     PA YP      V +      ++ AT
Sbjct: 3   LKRKLLVTALPFAFCISGLAHAMTLK-IAEIH---PAGYPTV----VAMENLGKKLETAT 54

Query: 55  GGKLKITVHAGASLFKAPEIKRAVQGGQAQIGEILLAAYQNEWQMFGADGLPFLATSYAD 114
            G++K  + AG  L    E+    Q G  Q+  + L +            +PF+      
Sbjct: 55  NGEIKSRMFAGGVLGSEKEVIEQTQIGAVQLTRVSLGSVGPVVPATNVFNMPFVFRDIDH 114

Query: 115 SMKLYKAQ--KPILEKKLAEQGMTLLYTVAWPPQG---IYSKKPVASAADLKGSKWRAY- 168
             K+   +  + IL+  +      ++  +AW   G   +Y+KKP+    DLKG K R   
Sbjct: 115 MRKVVDGEIGQEILDA-ITNSDFNMV-GLAWMEAGSRSLYTKKPIRRIEDLKGMKIRVIG 172

Query: 169 SPATSRIAELVGAQPVTVQAAELSQALATGVVESNMTSGATGVDSKLYEHLKYYYDVQAW 228
           +P        +GA  + +   E+  AL +GV++    +  T ++   +   K+Y      
Sbjct: 173 NPLFIDTLNAMGANGIAMDTGEIFSALQSGVIDGAENNSPTLLEHNHFRVAKHYTQTHHL 232

Query: 229 LPKNAIIMNKRAFDALDKPTQDAVLKAGAEAEARG---WAASQKVNTDTLAILKANGM 283
           +    ++M+K  ++ L    Q  V K   EA+      W A +  + +    LKA G+
Sbjct: 233 ILPEPLLMSKDTWNKLSPEQQATVKKLAKEAQLEERDLWVAKETASNEK---LKAEGV 287