Pairwise Alignments

Query, 324 a.a., TRAP transporter solute receptor, unknown substrate 5 from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 334 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

 Score = 80.5 bits (197), Expect = 5e-20
 Identities = 73/265 (27%), Positives = 121/265 (45%), Gaps = 7/265 (2%)

Query: 2   KRRLFSLSVAAATMAMSLPALAQTKWDLPAAYPAT--NFHTVNLTAFANDVDKATGGKLK 59
           +R+L + +VAA    ++  A AQT       +P    +     +   A +V  A  G L+
Sbjct: 5   RRKLTTSAVAAICSLVASTAGAQTVLKASHQFPGGKGDIRDEMVQLIAREVAAANVG-LE 63

Query: 60  ITVHAGASLFKAPEIKRAVQGGQAQIGEILLAAYQNEWQMFGADGLPFLATSYADSMKLY 119
           I V  G+SL+K  +   AV  G   +    L         F A  +P L  ++  +M+L 
Sbjct: 64  IQVFPGSSLYKPNDQWNAVTRGLLDMTSFPLDYASGRHPEFSATLMPGLVGNFDRAMRLN 123

Query: 120 KAQKPILEKKLAEQGMTLLYTVAWPPQGIYSKKPVASAAD-LKGSKWRAYSPATSRIAEL 178
            ++     KK+ E    L+   AW      SKK   ++ D +KG   RA  PA   +   
Sbjct: 124 DSEFMGDIKKVIENAGALVIADAWLSGAFASKKNCITSPDTIKGQVIRAAGPAFEEMLVE 183

Query: 179 VGAQPVTVQAAELSQALATGVVESNMTSGATGVDSKLYEHLKYYY---DVQAWLPKNAII 235
            GA   ++ ++E+   + TGV+++  TS A+ V  +L+E  K      +   W     ++
Sbjct: 184 AGASISSMPSSEIYTGMQTGVLDAANTSSASFVSYRLFEQAKCLTAPGENALWFMYEPVL 243

Query: 236 MNKRAFDALDKPTQDAVLKAGAEAE 260
           ++KR FD L +  Q A+L AG +AE
Sbjct: 244 VSKRVFDGLTEEQQKAILAAGEKAE 268