Pairwise Alignments

Query, 324 a.a., TRAP transporter solute receptor, unknown substrate 5 from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 332 a.a., C4-dicarboxylate transport system, C4-dicarboxylate-binding protein precursor signal peptide from Sinorhizobium meliloti 1021

 Score = 64.3 bits (155), Expect = 4e-15
 Identities = 88/335 (26%), Positives = 140/335 (41%), Gaps = 37/335 (11%)

Query: 5   LFSLSVAAATMAMSLPALAQTKWDLPAAYPATNFHTVNLTAFANDVDKATGGKLKITVHA 64
           +  LS  +A MA +   L     D  + + A+       T FA +V + T G++KI +  
Sbjct: 20  IVGLSAHSAAMAETTIRLGHVLADTHSWHKAS-------TDFAKEVSEKTEGRVKIEIFP 72

Query: 65  GASLFKAPEIKRAVQGGQAQIGEILLAAYQNEWQMFGADGLPFLATSYADSM-----KLY 119
              L    E+   +Q G  Q G I   ++Q     FG   +P+  TS   +      KL 
Sbjct: 73  SGQLGTEKEVIEGMQIGTIQGGLIGSGSFQFVEPKFGIIEMPYAWTSREQAFAALDGKLG 132

Query: 120 KAQKPILEKKLAEQGMTLLYTVAWPPQGI----YSKKPVASAADLKGSKWRAYSPATSRI 175
            A   +L  K  E        +AW   G      +K P+   ADL G K R  +P   R+
Sbjct: 133 TALADLLRPKGIE-------VLAWWENGFRNITNNKHPIVKPADLAGIKIRV-TPDKVRL 184

Query: 176 A--ELVGAQPVTVQAAELSQALATGVVESNMTSGATGVDSKLYEHLKYYYDVQAWLPKNA 233
           A  E +GAQP  +   EL  AL  GV ++   +  + +D+  +  ++ Y  +   +   A
Sbjct: 185 ATFERLGAQPAPLAFGELYSALQQGVFDA-QENPLSIIDASSFYEVQKYVSMTGHIWGAA 243

Query: 234 IIMNKRAFDALDKPTQDAVLKAGAEAEARGWAASQKVNTDTLAI---LKANGMAV-EAPS 289
            +       A   P   A++K    A   G A  Q V  + +A+   LK+ GM   E   
Sbjct: 244 CLTVSSMTWAQVSPEDQAIVKEA--AVKWGNAQRQMVADNEVALIEKLKSKGMQFNEVDK 301

Query: 290 AALKADMQKVGETMVKEWLEKAGPEGQAMLDAYRK 324
           AA    ++ + E+      +  GPE   ++D+YRK
Sbjct: 302 AAFVDALKPIWESE----KDVFGPELLEVMDSYRK 332