Pairwise Alignments

Query, 324 a.a., TRAP transporter solute receptor, unknown substrate 5 from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 338 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

 Score = 78.6 bits (192), Expect = 2e-19
 Identities = 78/316 (24%), Positives = 136/316 (43%), Gaps = 13/316 (4%)

Query: 8   LSVAAATMAMSLPALAQTKWDLPAAYPATNF----HTVNLTAFANDVDKATGGKLKITVH 63
           L+V  A M    PALA+ + D    + + N         +  FA  V + +GGK+++ + 
Sbjct: 12  LAVPLALMTAG-PALAEIR-DQTVKFASANNKGHPQVTGMEKFAELVKEKSGGKIEVKLF 69

Query: 64  AGASLFKAPEIKRAVQGGQAQIGEILLAAYQNEWQMFGADGLPFLATSYADSMKLYKAQK 123
            G +L    +   A+QGG  ++  +      +  + FGA  LPFL  S  ++ K+     
Sbjct: 70  PGGTLGGDVQTVSALQGGVIEMTVLNAGILASNVKEFGAVDLPFLFDSGEEADKVMDG-- 127

Query: 124 PILEKKLAEQGMTLLYTVAWPPQGIYS----KKPVASAADLKGSKWRAY-SPATSRIAEL 178
           P     +     T L  VA+   G  +    + PV    D+KG K R   SP    +   
Sbjct: 128 PFGTSLMERLPATGLVGVAYWELGFRNLTNNRHPVTKLEDIKGLKIRTIQSPIPVELFNA 187

Query: 179 VGAQPVTVQAAELSQALATGVVESNMTSGATGVDSKLYEHLKYYYDVQAWLPKNAIIMNK 238
           +GA  V +   EL  AL TG V+      A  +++K YE  KY    +       ++++K
Sbjct: 188 LGANAVPLPYTELYTALETGTVDGQENPSANIINAKFYEVQKYMTLTRHQYNPQIVLVSK 247

Query: 239 RAFDALDKPTQDAVLKAGAEAEARGWAASQKVNTDTLAILKANGMAVEAPSAALKADMQK 298
           + +D L+   +  + +A  EA       S++ +   L  ++  GM V   SA     ++ 
Sbjct: 248 KFWDGLNDEEKTVLQQAAVEARDFQRKVSREQDAAALEEIRKTGMEVSELSAEETQKLRD 307

Query: 299 VGETMVKEWLEKAGPE 314
             + M++++    G E
Sbjct: 308 AVKPMIEKFSADIGQE 323