Pairwise Alignments

Query, 324 a.a., TRAP transporter solute receptor, unknown substrate 5 from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 347 a.a., TRAP dicarboxylate transporter- DctP subunit (RefSeq) from Dinoroseobacter shibae DFL-12

 Score = 70.5 bits (171), Expect = 6e-17
 Identities = 71/294 (24%), Positives = 125/294 (42%), Gaps = 16/294 (5%)

Query: 43  LTAFANDVDKATGGKLKITVHAGASLF-KAPEIKRAVQGGQAQIGEILLAAYQNEWQMFG 101
           +T +A  ++  + G++K+ ++    L  K P +   ++ G    G  L A     +    
Sbjct: 46  ITPWAEKIEAESEGRIKVEIYPAMQLGGKPPALYDQIRDGVIDCGWALPAYTPGRFPESE 105

Query: 102 ADGLPFLATSYADSMKLYKAQKPILEKKLAEQ-GMTLLYTVAWPPQGIYSKK--PVASAA 158
              LPF+ T  A++    +A     EK L E+ G   L  V     G+  KK  P+ S A
Sbjct: 106 VFELPFMTTMSAENSS--RAAWEFTEKYLMERMGDIHLMAVHVHGPGVIHKKGAPIMSTA 163

Query: 159 DLKGSKWRAYSPATSRIAELVGAQPVTVQAAELSQALATGVVESNMTSGATGVDSKLYE- 217
           D  G K R  S   +++ E +GA PV +      ++L+ G+V+  +         K++E 
Sbjct: 164 DFDGLKLRGPSRQANKLLETLGATPVGMPVPAFPESLSKGIVDGGVIPWEIVPPLKVHEL 223

Query: 218 ---HLKYYYDVQAWLPKNAIIMNKRAFDALDKPTQDAVLKAGAEAEARGWAASQKVNTDT 274
              H +   D   +       MNK  ++ L +  + A++ A +  EA  WA       D 
Sbjct: 224 ADSHTQIGGDRALYNTFFLWGMNKATYEGLPEDLR-AIIDANSGLEASAWAGRAMDQGDG 282

Query: 275 LA--ILKANGMAVEAPSAALKADMQKVGETMVKEW---LEKAGPEGQAMLDAYR 323
           L   ++      +     A  A+++K+G+ +   W   +E  G  G AM+D  R
Sbjct: 283 LGEEVVAGTDNKIHTLDDATVAELRKIGDDLTAAWIAEMEDKGLPGAAMVDDAR 336