Pairwise Alignments

Query, 350 a.a., Vanillate O-demethylase oxygenase subunit (EC 1.14.13.82) from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 349 a.a., Rieske (2Fe-2S) protein from Herbaspirillum seropedicae SmR1

 Score =  162 bits (410), Expect = 1e-44
 Identities = 117/353 (33%), Positives = 174/353 (49%), Gaps = 19/353 (5%)

Query: 1   MFIKNCWYVAAWDHEVLADTLLERGILNQSILIYRLADGTPVALDNKCPHRHAPLHMGR- 59
           MF KN WYVA    E+ +  L  R I  + I+ YR A G   A+++ CPHR APL +G  
Sbjct: 1   MFPKNAWYVACTPDEIDSKPL-GRQICGEKIVFYRGAGGKVAAVEDFCPHRGAPLSLGFV 59

Query: 60  REGDSVRCMYHGLKFDATGQCTEIPGQERIPPKLCVKSYPMVQRGRWLWIWMGDPALADE 119
           REG  V C YHGL+    G+   +PGQ R+    C++SYP+ +R  ++W+W GD   AD 
Sbjct: 60  REGQLV-CGYHGLEMGCDGKAISMPGQ-RVRGFPCIRSYPVEERYGFIWVWPGDKEQADP 117

Query: 120 ALIPDAYSLNHPEWRMKPGYLHYDADYQLISDNLLDFSHLSYVHEKTLGGSPNIAEVKPV 179
           A I      ++PEW    G  H + DY+L+ DNL+D +H +YVH  ++G      +  PV
Sbjct: 118 AQIHHLEWADNPEWAYGGGLYHINCDYRLMIDNLMDLTHETYVHASSIGQKE--IDEAPV 175

Query: 180 IERLE-RGVRVTRDVHNTVPAPYHARLGGFTG-----KVNRRFSYDYLVPGVLLMAASVK 233
             R+E   V  +R + N +P P+        G      V+R     +  P  +++   V 
Sbjct: 176 NTRVEGEQVITSRFMDNIMPPPFWRMALRGNGLADDVPVDRWQICRFSPPSHVMIEVGVA 235

Query: 234 PADTPDDDMTGALQFHS--CQALTPETDTTTHYFFMQAHKFRLDDATITESIYQSLCTAF 291
            A     +     +  S     +TPET+T+  YF+  A  FR  D  +T++I +     F
Sbjct: 236 HAGHGGYEAGPEHKASSIVVDFITPETETSHWYFWGMARHFRPQDKELTDTIREGQGKIF 295

Query: 292 EEDRRIIEAQQRLIRRTPPSPMQPIAADAALNQFR-----WLIKRMHDEEAAA 339
            EDR ++E QQ  + R P   +  +  DA   Q R     WL +   D + AA
Sbjct: 296 GEDREMLELQQANLLRHPERRLLALNIDAGGVQSRKVLDKWLAREAGDGQPAA 348