Pairwise Alignments

Query, 618 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 653 a.a., long-chain fatty acid--CoA ligase from Herbaspirillum seropedicae SmR1

 Score =  394 bits (1011), Expect = e-114
 Identities = 215/602 (35%), Positives = 333/602 (55%), Gaps = 7/602 (1%)

Query: 22  TIPALFWNGVKERGPAIWMRQKDFGIWRSWTWDQTGTAVREIAHGLMALGFEARETASIL 81
           T P L     ++R      R+KD GIW++ +W Q    VR  A GL ALGF    + +I+
Sbjct: 12  TFPRLLLAHARQRPERAAFREKDLGIWQTTSWRQVAEEVRSFACGLAALGFRRGMSLAII 71

Query: 82  SNTTVEWVLCDLAVLSAGGVANGIYPTDAAEQVQYLCDDSATTVLFVEDDEQLDKALEVR 141
            N          A  + GG+   +Y    A  + Y+  D+    +  ED EQ+DK  E++
Sbjct: 72  GNNCPRLYWAMSAAQALGGMPVPLYQDAPAADMAYVLADANVDFVMAEDQEQVDKVFEIK 131

Query: 142 AHLPRLKKIVVVDMEGLRDLHDPQVISLAALREMGRAHLAQHPGLVEVRVAAVKPEDLAI 201
             LPR+  ++  D  G+R+ H P+++S A ++E+GRA+   HP   +  +AA  P+D+AI
Sbjct: 132 ESLPRIAHVIYDDERGMRNYHQPELLSFARVQELGRAYERAHPDFFDQEIAAGSPDDVAI 191

Query: 202 LVYTSGTTGRPKGAMHSHQGLVYTVRGYNTLIARDENDECMCFLPLCHIAERMGGEYFSL 261
           ++YTSGTTG+PKG  HSH+ ++ T          DEND+ +C+LPL  + + +       
Sbjct: 192 ILYTSGTTGKPKGVCHSHRAMITTATTLVEFDHLDENDDILCYLPLAWVGDFLYSFAQQH 251

Query: 262 YTGAKLNFVENPETVPENVREIAPTVFTAVPRVWEKFYSGVMIALKEASQLQQAAYAWAI 321
             G  LN  E+P TV  ++REI PT + A PRV+E   + VMI +++A  L++  +   +
Sbjct: 252 VAGFCLNCPESPNTVMTDLREIGPTYYFAPPRVYENILTQVMIRIEDAGWLKRKMFHGFM 311

Query: 322 GVGQKVADRVMAGQPVPGGL-RLQFRLARLLVLDNVRKLIGIHRARFLVTGAAPISPDLV 380
            V ++V  R++ G+P    L RLQ+ L  LLV   ++ ++G+ R R   TG   I PDL 
Sbjct: 312 KVARRVGMRILDGKPGVSLLDRLQYGLGSLLVYGPLKNVLGMSRLRVAYTGGEAIGPDLF 371

Query: 381 RWYLALGVPMLEVWGMTETCGASTGIPAARIKPGSIGPAATYNEVRLDPQTGEILVRGPN 440
            +Y +LG+ + +++GMTETC      P+  +K  S+G      EVR+D + GE+LVR P 
Sbjct: 372 DFYRSLGINLKQLYGMTETCVTVCMQPSGDVKLDSVGRPMKGVEVRID-ENGEVLVRSPG 430

Query: 441 VFMGYLNLPEKTAETIDTDGWLHTGDVGQVDEEGFFRITDRMKDIIITAGGKNITPSELE 500
           +   Y   P+ TAE ID +G+ HTGD G  D +G  +I DR KD+   A G    P  +E
Sbjct: 431 LMKEYFKRPDATAEAIDANGYFHTGDAGFFDSDGHLKIIDRAKDVGKMASGSMFAPKYIE 490

Query: 501 NELKFSPYVTDAVVIGDKRPYLTVIIMIDQENVEKYAQDNDVPFSNYASLTRSPEVQSLI 560
           N+LKF P++ +AV  G+ R      I ID + V  +A+  ++ +S Y  L  +P V +L+
Sbjct: 491 NKLKFFPFIKEAVTFGNGREQCMAFINIDMDAVGNWAERRNLAYSGYTDLAANPAVYALL 550

Query: 561 QAEIDRVNKKFA-----RVEQIKKFFLLDTQLSAEDEELTPTMKLKRKLVQQKYADQIEA 615
           +  +++VN   A        QI +F +L  +L  +DEELT T K++R  +  KYA  IEA
Sbjct: 551 RECVEKVNADLAADPLLADSQIHRFLILHKELDPDDEELTRTRKVRRGFIADKYAVLIEA 610

Query: 616 MY 617
           +Y
Sbjct: 611 LY 612