Pairwise Alignments

Query, 618 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 618 a.a., long-chain fatty acid--CoA ligase from Bifidobacterium breve UCC2003

 Score =  286 bits (731), Expect = 2e-81
 Identities = 179/577 (31%), Positives = 302/577 (52%), Gaps = 24/577 (4%)

Query: 46  GIWRSWTWDQTGTAVREIAHGLMALGFEARETASILSNTTVEWVLCDLAVLSAGGVANGI 105
           G W+ ++       V ++A GL+ LG    ++ +I+S T  EW   D+A++S G +   +
Sbjct: 57  GTWQPYSALVFRDMVIDLAKGLIGLGVNKGDSVAIVSRTRWEWTALDMAIMSIGALTVPV 116

Query: 106 YPTDAAEQVQYLCDDSATTVLFVEDDEQLDKALEVRAHLPRLKKIVVVDMEGLRDLHDPQ 165
           Y T++A QV ++ +DS  T+   EDD Q DK   VR+ +P L+ + V++  GL       
Sbjct: 117 YETNSASQVSWIFNDSKVTLAIAEDDGQRDKIESVRSEVPTLRNVFVIEAGGLN------ 170

Query: 166 VISLAALREMGRAHLAQHPGLVEVRVAAVKPEDLAILVYTSGTTGRPKGAMHSHQGLVYT 225
                A++  G +         E + A+   +D A +VYTSG+TG PKG   +H+   + 
Sbjct: 171 -----AIKTYGES--VTDAEFWEYKNAS-HGDDRATIVYTSGSTGTPKGVELTHRNFAFL 222

Query: 226 VRGYNTLIARD---ENDECMCFLPLCHIAERMGGEYFSLYTGAKLNFVENPETVPENVRE 282
           VR     + R     N   + FLPL H+  R   E+FS      L    N +T+ ++   
Sbjct: 223 VRSALQYMPRAGAWPNRRLLLFLPLSHVFARFM-EFFSFGGTISLALSSNMKTMVKDFET 281

Query: 283 IAPTVFTAVPRVWEKFYSGVMIALKEASQLQQAAYAWAIGVGQKVADRVMAGQPVPGGLR 342
             PT+  AVPRV+EK Y+    + +  S      +  A+   ++ +     G+ +P   R
Sbjct: 282 FGPTLLLAVPRVYEKVYNAA--SQRAGSGFAGKMFMRAVENAREWSKAEQKGEKLPLPGR 339

Query: 343 LQFRLARLLVLDNVRKLIGIHRARFLVTGAAPISPDLVRWYLALGVPMLEVWGMTETCGA 402
           +       +V   +R + G + A F +TG AP+  +L  ++  +G+P+LE +GMTETCG 
Sbjct: 340 VAHAFYEQVVYKKIRTIFGPN-ADFAITGGAPMDSELSHFFNGIGMPVLEGYGMTETCGP 398

Query: 403 STGIPAARIKPGSIGPAATYNEVRLDPQTGEILVRGPNVFMGYLNLPEKTAETIDTDGWL 462
                    + G+IG         +  + GE++V+GP V  GY N PE T + I TDGWL
Sbjct: 399 VCVSLPEDNRIGTIGMPMCGITAGI-AEDGELVVKGPLVCKGYHNNPEVTTQQI-TDGWL 456

Query: 463 HTGDVGQVDEEGFFRITDRMKDIIITAGGKNITPSELENELKFSPYVTDAVVIGDKRPYL 522
           HTGD+G + E+GF  IT R KD+IITAGGKN++P  LE  +  SP V   +VIGDK+P++
Sbjct: 457 HTGDLGDISEDGFISITGRKKDLIITAGGKNVSPGLLEASVMTSPVVNQCLVIGDKKPFV 516

Query: 523 TVIIMIDQENVEKYAQDNDV-PFSNYASLTRSPEVQSLIQAEIDRVNKKFARVEQIKKFF 581
             ++ +D  +   + +     P  +  +L ++  V + ++  ++  N+  +R E I+KF 
Sbjct: 517 AALVTLDLVDANNWLESQGAKPEPDLDALAKNAIVHAEVERAVNAANEGVSRAESIRKFE 576

Query: 582 LLDTQLSAEDEELTPTMKLKRKLVQQKYADQIEAMYH 618
           +L  + +  +  LTP++K +R  + + Y + I+++ +
Sbjct: 577 ILPDEFTEANGMLTPSLKARRAQIVKHYQELIDSVIY 613