Pairwise Alignments

Query, 618 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 686 a.a., long-chain fatty acid--CoA ligase from Bifidobacterium breve UCC2003

 Score =  264 bits (675), Expect = 8e-75
 Identities = 177/572 (30%), Positives = 296/572 (51%), Gaps = 25/572 (4%)

Query: 48  WRSWTWDQTGTAVREIAHGLMALGFEARETASILSNTTVEWVLCDLAVLSAGGVANGIYP 107
           WR  T  +  + VRE+A GL+ LG +A     I S T  EW + D A  + G V   +Y 
Sbjct: 45  WRGATATEMLSRVREVAKGLLGLGVKAGSMVLIYSPTCYEWGVADFACAAIGAVVVPVYE 104

Query: 108 TDAAEQVQYLCDDSATTVLFVEDDEQLDKALEVRAHLPRLKKIVVVDMEGLRDLHDPQVI 167
           TD+A+Q   + ++    + F    +      ++RA  P LK +     +GL         
Sbjct: 105 TDSAKQTAGIVEEVDPVIAFAGGFQHAQTLEQIRAAHPGLKYVFNFKADGLD-------- 156

Query: 168 SLAALREMGRAHLAQHPGLVEVRVAAVKPEDLAILVYTSGTTGRPKGAMHSHQGLVYTV- 226
              A+ + G+    +   +++  +A +K +DL  +VYTSG+TG+PKGAM S++   + V 
Sbjct: 157 ---AVADFGQNVSDE---ILDAAIARIKADDLLTVVYTSGSTGKPKGAMLSNRNYTHIVL 210

Query: 227 RGYNTL--IARDENDECMCFLPLCHIAERMGGEYFSLYTGAKLNFVENPETVPENVREIA 284
            GY  L  +  D+N   + FLPL H   R   +Y  +     + ++ + + +  ++R   
Sbjct: 211 NGYEILRGMLYDDN-RLLLFLPLAHCFARYI-QYVCIGGCGVVGYIPDAKHLLADIRSFK 268

Query: 285 PTVFTAVPRVWEKFYSGVMIALKEASQLQQAAYAWAIGVGQKVADRVMAGQPVPGGLRLQ 344
           PT    VPRV+EK Y+    + K  + +Q   +A ++    K +    +G       R+ 
Sbjct: 269 PTYLLGVPRVFEKVYNAA--SQKAGAGVQGHIFALSVKHFVKWSKDEQSGHGHSFIDRMA 326

Query: 345 FRLARLLVLDNVRKLIGIHRARFLVTGAAPISPDLVRWYLALG-VPMLEVWGMTETCGAS 403
                  V  ++R  +G +  ++L  G AP++ DL  ++  +  +  ++ +GMTET    
Sbjct: 327 HSFFMATVGKSIRSALGPN-LKWLACGGAPLNVDLAHFFNGMDDITFIQGYGMTETAAPM 385

Query: 404 TGIPAARIKPGSIGPAATYNEVRLDPQTGEILVRGPNVFMGYLNLPEKTAETIDTDGWLH 463
                   + GS+G       VRL  +  EI + GPNVF+GY   PE TA+ +  DGW+ 
Sbjct: 386 LVNWEDDNEVGSVGKPGPGMGVRLG-EDDEIELTGPNVFLGYYKQPELTAQAMTADGWIK 444

Query: 464 TGDVGQVDEEGFFRITDRMKDIIITAGGKNITPSELENELKFSPYVTDAVVIGDKRPYLT 523
           TGD+G++++ GF  IT R KDIIITAGGKNI+P+ +E+ +   P V  AVV+GD +P+++
Sbjct: 445 TGDLGRIEDRGFTYITGRKKDIIITAGGKNISPAPMEDVIDTCPIVAHAVVVGDGKPFVS 504

Query: 524 VIIMIDQENVEKYAQDNDV-PFSNYASLTRSPEVQSLIQAEIDRVNKKFARVEQIKKFFL 582
            +I +D E +  + +   + P  + A  + +  V++ +Q  ID+ N   +R E ++KF +
Sbjct: 505 ALIELDPEMLHSWLEGQGLDPDMSLAEASGNDAVRAFVQQYIDQANANVSRAESVRKFAI 564

Query: 583 LDTQLSAEDEELTPTMKLKRKLVQQKYADQIE 614
           LD + + E   LTP+MK+ R  V Q+Y   IE
Sbjct: 565 LDEEFNQEHGTLTPSMKVVRPKVLQRYTAIIE 596