Pairwise Alignments

Query, 618 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 607 a.a., long-chain fatty acid--CoA ligase from Bifidobacterium breve UCC2003

 Score =  310 bits (795), Expect = 9e-89
 Identities = 197/585 (33%), Positives = 315/585 (53%), Gaps = 44/585 (7%)

Query: 46  GIWRSWTWDQTGTAVREIAHGLMALGFEARETASILSNTTVEWVLCDLAVLSAGGVANGI 105
           G W++ T  +    V   A GL+ALG    +  +I S+T +EW + D A+ + G V+  I
Sbjct: 45  GRWQNVTTGEFHERVVSAAKGLIALGITKGDAVTIFSSTRLEWGILDFALAAVGAVSVPI 104

Query: 106 YPTDAAEQVQYLCDDSATTVLFVEDDEQLDKALEVRAHLPRLKKIVVVDMEGLRDLHDPQ 165
           Y TD+A Q Q + +DSA  + F ++ E+ D+   V+ H P LK+I+++D           
Sbjct: 105 YDTDSAPQAQRIMNDSAVKLAFADNRERYDRLDSVKDHCPTLKQILMIDGN--------- 155

Query: 166 VISLAALREMGRAHLAQHPGLVEVRVAAVKPEDLAILVYTSGTTGRPKGAMHSHQGLV-Y 224
             +L AL  +G A   +    ++  VA V+  DLA +VYTSG+TG PKGA  +H+  V  
Sbjct: 156 --ALGALEGLGVAVSDEE---LDEHVATVRTNDLATIVYTSGSTGNPKGAELTHKNFVSI 210

Query: 225 TVRGYNTL--IARDENDECMCFLPLCHIAERMGGEYFSLYTG-AKLNFVENPETVPENVR 281
           T+     L  +  D++   + FLPL H   R   +Y S+ +    + ++ + +++  ++R
Sbjct: 211 TIAASQALHEVVLDDHPRLLLFLPLAHCFARFI-QYASIASDDGVVGYLTDTKSLLPDLR 269

Query: 282 EIAPTVFTAVPRVWEKFYSGVMIALKEASQLQQAAYAWAIGVGQKVAD--RVMAGQPVPG 339
              PT    VPRV+EK Y+             +A   W   +  K A+  RV + +   G
Sbjct: 270 SFEPTYLLGVPRVFEKVYNAAS---------HKAGTGWKGRLFLKAAEAARVWSRKEQSG 320

Query: 340 GLRLQFRLAR-----LLVLDNVRKLIGIHRARFLVTGAAPISPDLVRWYLALGVPMLEVW 394
                  +A       LV   VR  +G  + +++  G AP+S DL  +Y  +G+PM++ +
Sbjct: 321 EQHTFAEIAERAKYETLVYRTVRGALG-PKIKYVACGGAPLSLDLAHFYNGIGLPMIQGY 379

Query: 395 GMTETCGASTGIPAARIKPGSIGPAATYNEVRLDPQTGEILVRGPNVFMGYLNLPEKTAE 454
           GMTET              G++G  A  + +R+  + GE+ V+GPNVF GY NLPEKTAE
Sbjct: 380 GMTETAAPFAATRVTDNVIGTVGQPAPGSSIRISDE-GELQVKGPNVFRGYHNLPEKTAE 438

Query: 455 TIDTDGWLHTGDVGQVDEEGFFRITDRMKDIIITAGGKNITPSELENELKFSPYVTDAVV 514
               DGWL TGD+ ++D+EG   IT R+KDIIITAGGKN++P  LE E+   P V   VV
Sbjct: 439 AFTADGWLRTGDLAEIDDEGRIIITGRIKDIIITAGGKNVSPIPLEEEIAKCPIVEHCVV 498

Query: 515 IGDKRPYLTVIIMIDQEN----VEKYAQDNDVPFSNYASLTRSPEVQSLIQAEIDRVNKK 570
           +GD+RP++  ++ +D E+    +  +    + P    A+   +  V+  IQ  +D+ N  
Sbjct: 499 VGDQRPFIGALVTLDPESLAIWLPAHGLSTETPVDRLAT---NAAVREEIQQYVDKANAT 555

Query: 571 FARVEQIKKFFLLDTQLSAEDEELTPTMKLKRKLVQQKYADQIEA 615
            +R E ++KF +LDTQ + E++ LTP++K+ R  V + +AD I++
Sbjct: 556 VSRAESVRKFAVLDTQFTQENKCLTPSLKVVRPAVNRVFADAIDS 600