Pairwise Alignments
Query, 1067 a.a., TPR repeat from Hydrogenophaga sp. GW460-11-11-14-LB1
Subject, 792 a.a., TPR/GGDEF domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710
Score = 68.9 bits (167), Expect = 1e-15
Identities = 63/228 (27%), Positives = 91/228 (39%), Gaps = 1/228 (0%)
Query: 522 DTVARNGLAEVLKELGDLAAARAQYENTLQSHPQNVVACNGLANVLKELGDLPAARSQYE 581
D++A N A+ LGD A +Y+ L + N +A N L + LG AR +E
Sbjct: 557 DSLALNISADKRFSLGDTFGAIEEYKTALLADEGNTMAWNSLGVCMAGLGRHGEARRYFE 616
Query: 582 NTLQRHPQDVFARSGLAEVLKELGDLPAARTQYENTLKSHPRDVVASCGLAEVLKELGDL 641
LQR P D A L V + LG+ AR QY LK P V A L ++ +
Sbjct: 617 QALQRKPGDPMALYNLGTVCQSLGETAEARKQYRKCLKYAPGHVFALVRLGQLAEGEKRY 676
Query: 642 PAAHVQYENTLQSHPQNVFARNGLAEVLKELGDLPAARAQYESTLQSHPQNVVASCGLAE 701
A + ++ LA + G AR L +PQ+ VA +A
Sbjct: 677 AQARQYFNKAARAGDSGGLVHRNLARLSMRQGRPDEAREHLHDALLRNPQDAVALQLMAR 736
Query: 702 VLKELGDLPA-ARAQYENTLKSHPQNVVTRNGLAEILKELGDLPAAQE 748
+ + G+ PA A A ++ P LA L G + A+E
Sbjct: 737 LYLDGGEDPAMAEALSRQSVALRPDLKQGWLELARALDARGHVAEARE 784
Score = 65.5 bits (158), Expect = 2e-14
Identities = 58/213 (27%), Positives = 85/213 (39%), Gaps = 1/213 (0%)
Query: 638 LGDLPAAHVQYENTLQSHPQNVFARNGLAEVLKELGDLPAARAQYESTLQSHPQNVVASC 697
LGD A +Y+ L + N A N L + LG AR +E LQ P + +A
Sbjct: 571 LGDTFGAIEEYKTALLADEGNTMAWNSLGVCMAGLGRHGEARRYFEQALQRKPGDPMALY 630
Query: 698 GLAEVLKELGDLPAARAQYENTLKSHPQNVVTRNGLAEILKELGDLPAAQELYENTLQSH 757
L V + LG+ AR QY LK P +V L ++ + A++ + ++
Sbjct: 631 NLGTVCQSLGETAEARKQYRKCLKYAPGHVFALVRLGQLAEGEKRYAQARQYFNKAARAG 690
Query: 758 PKNVFARNGLAELLKEQGDLPAARAQYENTLQSHPQNVVTSCGLAEVLKELGDLPA-ARA 816
LA L QG AR + L +PQ+ V +A + + G+ PA A A
Sbjct: 691 DSGGLVHRNLARLSMRQGRPDEAREHLHDALLRNPQDAVALQLMARLYLDGGEDPAMAEA 750
Query: 817 QYENTVQSHPQNVVARNGLANVLKELGDLPAAR 849
+V P LA L G + AR
Sbjct: 751 LSRQSVALRPDLKQGWLELARALDARGHVAEAR 783
Score = 61.6 bits (148), Expect = 2e-13
Identities = 60/227 (26%), Positives = 91/227 (40%), Gaps = 1/227 (0%)
Query: 488 DSVARCGLAEILKELGDLPAARALYEDTLQSHPQDTVARNGLAEVLKELGDLAAARAQYE 547
DS+A A+ LGD A Y+ L + +T+A N L + LG AR +E
Sbjct: 557 DSLALNISADKRFSLGDTFGAIEEYKTALLADEGNTMAWNSLGVCMAGLGRHGEARRYFE 616
Query: 548 NTLQSHPQNVVACNGLANVLKELGDLPAARSQYENTLQRHPQDVFARSGLAEVLKELGDL 607
LQ P + +A L V + LG+ AR QY L+ P VFA L ++ +
Sbjct: 617 QALQRKPGDPMALYNLGTVCQSLGETAEARKQYRKCLKYAPGHVFALVRLGQLAEGEKRY 676
Query: 608 PAARTQYENTLKSHPRDVVASCGLAEVLKELGDLPAAHVQYENTLQSHPQNVFARNGLAE 667
AR + ++ + LA + G A + L +PQ+ A +A
Sbjct: 677 AQARQYFNKAARAGDSGGLVHRNLARLSMRQGRPDEAREHLHDALLRNPQDAVALQLMAR 736
Query: 668 VLKELGDLPA-ARAQYESTLQSHPQNVVASCGLAEVLKELGDLPAAR 713
+ + G+ PA A A ++ P LA L G + AR
Sbjct: 737 LYLDGGEDPAMAEALSRQSVALRPDLKQGWLELARALDARGHVAEAR 783
Score = 59.3 bits (142), Expect = 1e-12
Identities = 61/234 (26%), Positives = 92/234 (39%), Gaps = 15/234 (6%)
Query: 740 LGDLPAAQELYENTLQSHPKNVFARNGLAELLKEQGDLPAARAQYENTLQSHPQNVVTSC 799
LGD A E Y+ L + N A N L + G AR +E LQ P + +
Sbjct: 571 LGDTFGAIEEYKTALLADEGNTMAWNSLGVCMAGLGRHGEARRYFEQALQRKPGDPMALY 630
Query: 800 GLAEVLKELGDLPAARAQYENTVQSHPQNVVARNGLANVLKELGDLPAARAQYENTLQSH 859
L V + LG+ AR QY ++ P +V A L + + AR + ++
Sbjct: 631 NLGTVCQSLGETAEARKQYRKCLKYAPGHVFALVRLGQLAEGEKRYAQARQYFNKAARAG 690
Query: 860 SQNVVARNGLANVLKELGDLPAARTQYENTLQSHPQDVVARNGLANVLRRMGAHAEAKAL 919
+ LA + G AR + L +PQD VA +A + G E A+
Sbjct: 691 DSGGLVHRNLARLSMRQGRPDEAREHLHDALLRNPQDAVALQLMARLYLDGG---EDPAM 747
Query: 920 LSGWAQAKGRQRLLDGVVFALACLPDASDEALKVLQALQADTNLQTKDRTRLNA 973
A+A RQ ++A PD L++ +AL A ++ RL A
Sbjct: 748 ----AEALSRQ--------SVALRPDLKQGWLELARALDARGHVAEAREARLRA 789
Score = 56.2 bits (134), Expect = 9e-12
Identities = 46/187 (24%), Positives = 80/187 (42%)
Query: 661 ARNGLAEVLKELGDLPAARAQYESTLQSHPQNVVASCGLAEVLKELGDLPAARAQYENTL 720
A N A+ LGD A +Y++ L + N +A L + LG AR +E L
Sbjct: 560 ALNISADKRFSLGDTFGAIEEYKTALLADEGNTMAWNSLGVCMAGLGRHGEARRYFEQAL 619
Query: 721 KSHPQNVVTRNGLAEILKELGDLPAAQELYENTLQSHPKNVFARNGLAELLKEQGDLPAA 780
+ P + + L + + LG+ A++ Y L+ P +VFA L +L + + A
Sbjct: 620 QRKPGDPMALYNLGTVCQSLGETAEARKQYRKCLKYAPGHVFALVRLGQLAEGEKRYAQA 679
Query: 781 RAQYENTLQSHPQNVVTSCGLAEVLKELGDLPAARAQYENTVQSHPQNVVARNGLANVLK 840
R + ++ + LA + G AR + + +PQ+ VA +A +
Sbjct: 680 RQYFNKAARAGDSGGLVHRNLARLSMRQGRPDEAREHLHDALLRNPQDAVALQLMARLYL 739
Query: 841 ELGDLPA 847
+ G+ PA
Sbjct: 740 DGGEDPA 746
Score = 55.5 bits (132), Expect = 2e-11
Identities = 53/213 (24%), Positives = 84/213 (39%), Gaps = 1/213 (0%)
Query: 604 LGDLPAARTQYENTLKSHPRDVVASCGLAEVLKELGDLPAAHVQYENTLQSHPQNVFARN 663
LGD A +Y+ L + + +A L + LG A +E LQ P + A
Sbjct: 571 LGDTFGAIEEYKTALLADEGNTMAWNSLGVCMAGLGRHGEARRYFEQALQRKPGDPMALY 630
Query: 664 GLAEVLKELGDLPAARAQYESTLQSHPQNVVASCGLAEVLKELGDLPAARAQYENTLKSH 723
L V + LG+ AR QY L+ P +V A L ++ + AR + ++
Sbjct: 631 NLGTVCQSLGETAEARKQYRKCLKYAPGHVFALVRLGQLAEGEKRYAQARQYFNKAARAG 690
Query: 724 PQNVVTRNGLAEILKELGDLPAAQELYENTLQSHPKNVFARNGLAELLKEQGDLPA-ARA 782
+ LA + G A+E + L +P++ A +A L + G+ PA A A
Sbjct: 691 DSGGLVHRNLARLSMRQGRPDEAREHLHDALLRNPQDAVALQLMARLYLDGGEDPAMAEA 750
Query: 783 QYENTLQSHPQNVVTSCGLAEVLKELGDLPAAR 815
++ P LA L G + AR
Sbjct: 751 LSRQSVALRPDLKQGWLELARALDARGHVAEAR 783
Score = 54.3 bits (129), Expect = 3e-11
Identities = 55/216 (25%), Positives = 91/216 (42%), Gaps = 6/216 (2%)
Query: 430 LDNAQRRAD-ALLSRQAQEGTQTALQSKTAASLATAFAEA-GHLQQAKTWWQRAIELNTV 487
L+NA + + ALL + + G +L +A + + G +++ KT A+ +
Sbjct: 535 LENALKALEYALLLPEPRVGIFDSLALNISADKRFSLGDTFGAIEEYKT----ALLADEG 590
Query: 488 DSVARCGLAEILKELGDLPAARALYEDTLQSHPQDTVARNGLAEVLKELGDLAAARAQYE 547
+++A L + LG AR +E LQ P D +A L V + LG+ A AR QY
Sbjct: 591 NTMAWNSLGVCMAGLGRHGEARRYFEQALQRKPGDPMALYNLGTVCQSLGETAEARKQYR 650
Query: 548 NTLQSHPQNVVACNGLANVLKELGDLPAARSQYENTLQRHPQDVFARSGLAEVLKELGDL 607
L+ P +V A L + + AR + + LA + G
Sbjct: 651 KCLKYAPGHVFALVRLGQLAEGEKRYAQARQYFNKAARAGDSGGLVHRNLARLSMRQGRP 710
Query: 608 PAARTQYENTLKSHPRDVVASCGLAEVLKELGDLPA 643
AR + L +P+D VA +A + + G+ PA
Sbjct: 711 DEAREHLHDALLRNPQDAVALQLMARLYLDGGEDPA 746
Score = 44.7 bits (104), Expect = 3e-08
Identities = 39/129 (30%), Positives = 56/129 (43%), Gaps = 6/129 (4%)
Query: 830 VARNGLANVLKELGDLPAARAQYENTLQSHSQNVVARNGLANVLKELGDLPAARTQYENT 889
+A N A+ LGD A +Y+ L + N +A N L + LG AR +E
Sbjct: 559 LALNISADKRFSLGDTFGAIEEYKTALLADEGNTMAWNSLGVCMAGLGRHGEARRYFEQA 618
Query: 890 LQSHPQDVVARNGLANVLRRMGAHAEAKALLSGWAQAKGRQRLLDGVVFALACLPDASDE 949
LQ P D +A L V + +G AEA+ Q + + G VFAL L ++
Sbjct: 619 LQRKPGDPMALYNLGTVCQSLGETAEAR------KQYRKCLKYAPGHVFALVRLGQLAEG 672
Query: 950 ALKVLQALQ 958
+ QA Q
Sbjct: 673 EKRYAQARQ 681
Score = 28.1 bits (61), Expect = 0.003
Identities = 13/42 (30%), Positives = 21/42 (50%)
Query: 8 THPLQRMAVQLEHAVARRDSRVLNQWLCGYGLPRLSHEGELP 49
THPL R+ V L ++ R+ + + W Y + +HE P
Sbjct: 313 THPLSRVMVNLGRSMNAREGQRFSVWSVAYPVRGGTHEPRQP 354