Pairwise Alignments

Query, 266 a.a., Glutamate ABC transport system, permease protein from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 596 a.a., polar amino acid ABC transporter, inner membrane subunit (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  111 bits (278), Expect = 3e-29
 Identities = 81/248 (32%), Positives = 130/248 (52%), Gaps = 14/248 (5%)

Query: 26  AIAAALLLLLVVGIV-FRFHTAGQ--LEARFWSFFAWPTTWAFLAKGLLGTMASAATAAV 82
           A+ A LL  +  G++ F++H   +       W F        FL    LG +A +   AV
Sbjct: 342 ALLAGLLYSVGKGLLGFQWHVVFENLRSLLIWHFPTGRPDEMFLG---LGGLAYSLLMAV 398

Query: 83  IALA----LGLVLLLGRLARTRLVRWPSIAAIEFLRGTPTLLLIYVCFLVLPSI-GLKLS 137
           IA++    +GL + +GR +  R+ R P +  IE +RG P +++I+  +  +P + G  L+
Sbjct: 399 IAISVSFFIGLAVGVGRSSSNRVFRIPCLLYIELIRGNPLIIVIFWVYFFIPVMFGTTLN 458

Query: 138 TYWMLTLPVGLSTAAVVAEVYRAGVLAVPRGQTDAARSLGLTEAQVFFSVVFPQALRYIV 197
            +W  T  +   T A +AE+ R G+  +P GQ +AA S GLT  Q    +V PQAL+ ++
Sbjct: 459 VFWSATWALTAFTGAYIAEIVRTGIQNIPAGQVEAAYSTGLTYLQAMRRIVLPQALKQMI 518

Query: 198 PALVAQLVIVVKDTTFGYVVTYGELMQNAKVLIANYHSLVP--VYLVVAALYCLVNYGIS 255
           PA+V Q + + KDT+  +V+   EL   A+  I N   + P  +Y  VA LY +  Y +S
Sbjct: 519 PAIVGQFIAIFKDTSLAFVLGVLELTFVAQG-INNRLMIHPMEIYGTVAFLYFICCYSMS 577

Query: 256 KASKRLGR 263
             + RL R
Sbjct: 578 VFAARLER 585



 Score = 90.9 bits (224), Expect = 6e-23
 Identities = 55/174 (31%), Positives = 97/174 (55%), Gaps = 11/174 (6%)

Query: 64  AFLAKGLLGTMASAATAAVIALALGLVLLLGRLARTRLVRWPSIAAIEFLRGTPTLLLIY 123
           A + KGL  T+  +  ++ +AL LG +L L RL+  R +R  +   IEF R TP L+ ++
Sbjct: 55  AEILKGLANTVRISLISSALALLLGTMLGLARLSLFRPLRVTATCVIEFFRNTPLLIQLF 114

Query: 124 VCFLVLPSI----------GLKLSTYWMLTLPVGLSTAAVVAEVYRAGVLAVPRGQTDAA 173
             +   P+I           ++   +W  T+ + + TA+ +AEV RAG+ ++P+G  +AA
Sbjct: 115 FWYFAFPAILPDNAREALFSIQFE-FWCATIGLSIYTASFMAEVIRAGLQSIPKGLLEAA 173

Query: 174 RSLGLTEAQVFFSVVFPQALRYIVPALVAQLVIVVKDTTFGYVVTYGELMQNAK 227
            S GL+  QV  +++ P A R I+P L ++ +  +K+++   VV   EL  +A+
Sbjct: 174 YSSGLSYFQVLRTIILPLAFRAIIPPLGSEFLNNMKNSSLAMVVGVAELTWHAQ 227