Pairwise Alignments

Query, 90 a.a., Type III secretion inner membrane protein (YscS,homologous to flagellar export components) from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 88 a.a., flagellar biosynthesis protein FliQ from Azospirillum brasilense Sp245

 Score = 53.1 bits (126), Expect = 6e-13
 Identities = 26/84 (30%), Positives = 48/84 (57%)

Query: 2  IESADFVSLAVKGLYLSLVLSMPMVAAAAIVGTLMAVIQALTQIQEQTLGYAVKLIATAV 61
          +  AD + +   G++  L+++ P +  A +VG  ++++QALTQ+QE TL +  K++A  V
Sbjct: 1  MNEADVLEVLRTGIWTMLLIAAPPLVIAVLVGVAISLVQALTQVQEMTLTFVPKIVAILV 60

Query: 62 ALTLTLNWIGSEILQYTRQLFDLI 85
             L L ++   +  Y  +L  LI
Sbjct: 61 TTVLALPFMYGALTTYADRLGSLI 84