Pairwise Alignments

Query, 90 a.a., Type III secretion inner membrane protein (YscS,homologous to flagellar export components) from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 86 a.a., type III secretion protein, HrpO family (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 78.2 bits (191), Expect = 2e-20
 Identities = 35/75 (46%), Positives = 56/75 (74%)

Query: 8  VSLAVKGLYLSLVLSMPMVAAAAIVGTLMAVIQALTQIQEQTLGYAVKLIATAVALTLTL 67
          ++ AVK LYL L+LSMP +  A+++G L++++QA+TQ+QEQTL + VKLIA  + L L  
Sbjct: 6  MTYAVKALYLVLMLSMPPIVVASVIGILISLVQAITQLQEQTLTFGVKLIAVVLTLFLMG 65

Query: 68 NWIGSEILQYTRQLF 82
           W G+E+L++  ++F
Sbjct: 66 GWFGAELLRFADEIF 80