Pairwise Alignments

Query, 90 a.a., Type III secretion inner membrane protein (YscS,homologous to flagellar export components) from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 87 a.a., Flagellar biosynthesis pathway, component FliQ from Sphingomonas koreensis DSMZ 15582

 Score = 58.9 bits (141), Expect = 1e-14
 Identities = 30/84 (35%), Positives = 50/84 (59%)

Query: 2  IESADFVSLAVKGLYLSLVLSMPMVAAAAIVGTLMAVIQALTQIQEQTLGYAVKLIATAV 61
          + + D + +A   L L L ++ PM+ AA IVG ++ ++QALTQ+QE TL +  K++   V
Sbjct: 1  MNAVDAIEIARAALMLVLTIAGPMLIAALIVGVVIGLLQALTQVQEMTLTFVPKIVVLGV 60

Query: 62 ALTLTLNWIGSEILQYTRQLFDLI 85
           L L+L  IG  +  +  ++ D I
Sbjct: 61 VLLLSLPMIGHSMTVFMDRISDAI 84