Pairwise Alignments

Query, 466 a.a., RND efflux system, outer membrane lipoprotein, NodT family from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 512 a.a., secretion protein from Burkholderia phytofirmans PsJN

 Score =  196 bits (498), Expect = 2e-54
 Identities = 148/488 (30%), Positives = 236/488 (48%), Gaps = 45/488 (9%)

Query: 19  LAACATGGDYRAPEMALPAGFQHA-GAPAAAAAIQ----PDWWNVYGDADLDRLLRRVGE 73
           L  C  G ++  P+ A P  F     A AA+ A++    P WW ++ D  LD L +++ +
Sbjct: 21  LTGCLVGPNFEPPQTATPDVFNRTRSAQAASKAVESGFTPQWWTLFNDPILDSLEQQLSD 80

Query: 74  ANAELAQAEARWRQALAQVDAARALALPQVGVGASATRSGGN------------------ 115
           AN ++A A AR RQ+ AQ   A A   P +   AS  R  G+                  
Sbjct: 81  ANLDVAAASARLRQSRAQQRIAGAEEYPTLNGAASYDRERGSPNGILSLLGVTPTGSQTQ 140

Query: 116 AAAGTS------------AGTRRLYAAGADLSWSPDLWGRVALSRQAAMAGAEAQAALMD 163
           +A+G++            +    LY  G D SW  D WGRV    +AA A ++A     +
Sbjct: 141 SASGSAPLGVAPLPGAKGSPAYDLYQFGFDASWELDFWGRVRRGVEAASALSDASYEDRN 200

Query: 164 AARLALQLAAAQGYVRLRALDAQLALQAQ-ADVAYARSLQVTQLQYEAGLVARADVIQAE 222
           A  L+ +   A+ Y++LR   A L +  Q  D+A+  + ++TQ +   G+    DV  A 
Sbjct: 201 AILLSARAELARDYIQLRDTQALLQIAKQNLDIAHDAT-KLTQNRVHEGVTTDLDVANAM 259

Query: 223 TQLQSLRTQVFTLQRQRALEANALALLAGSTP-AEYPMAARDAALPAVP-AVPTALPGEL 280
            Q +S+ + + TL+ +     NA+ +L    P A   M A    +PA+P  VP  +P EL
Sbjct: 260 AQAESIESLIPTLESRNTTTINAIGVLLAKEPGALQQMLAEPHDVPALPDQVPIGVPSEL 319

Query: 281 LRRRPDLAAAERALAAAHARLGVAQRAWLPDLTLSASGTLQASSWSRLLDAPARVWSLGP 340
           ++RRPD+  AE  L AA A +G+A+  + P ++L+ S   Q+   S L D  +  + +GP
Sbjct: 320 VQRRPDIRKAEAQLHAATATIGMAKADFYPRISLNGSAGFQSLQLSNLADWASGQFVVGP 379

Query: 341 QLAATLFDGGARRADEAAFLAAYDEQAAAWRGGVLAAVRETEDALVQLATLAEQDRQQQQ 400
            +   +F+GG  +       A   E A  ++  VL A RE +DALV       + R++ +
Sbjct: 380 SITLPIFEGGRLKGTLHLREAQQQEAAIVYQHTVLQAWREVDDALV---VYDAEQRRRDR 436

Query: 401 LVRLASENER---VVGYRYEAGEISFLEVATAQNLALSARRAALDVQADRLAASMALVAA 457
           L  + S N+R   +   RY+AG ++FL+V   Q   L A+      +AD  A  + L   
Sbjct: 437 LKTVVSLNQRALSIAQQRYKAGAVNFLDVLNVQKQLLDAQSKLEQSKADADANLITLCKV 496

Query: 458 LGGGWQAS 465
           LGGGW+++
Sbjct: 497 LGGGWEST 504