Pairwise Alignments

Query, 130 a.a., Two-component response regulator from Hydrogenophaga sp. GW460-11-11-14-LB1

Subject, 466 a.a., two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 52.8 bits (125), Expect = 6e-12
 Identities = 47/120 (39%), Positives = 57/120 (47%), Gaps = 8/120 (6%)

Query: 1   MAIPQRFILVDDNEADNVYHEIMIRRAGFT-GEVLVFESGAEALDFLGCDPLTAPTCLFL 59
           M  P   ILV D+EAD         RAGF   EVLV  SG   LD LG    + P  L  
Sbjct: 1   MTTPHETILVVDDEADFANGLARQLRAGFPDAEVLVATSGKAGLDLLG---RSDPAVLLT 57

Query: 60  DINMPQMDGFEFARLAQPLLQDKPTLLVMMLTSSDAAQDQKRASQMPLIQGFVTKPLTRE 119
           D+ MP MDG E    AQ   QD  T  V++LT+    +    A +      F+TKP+ RE
Sbjct: 58  DLRMPDMDGLELMAHAQ--TQD-ATPSVILLTAHGTIETAVTALKNGAYD-FLTKPVRRE 113